Repbase Reports |
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| 2002, Volume 2, Issue 2 |
| February 28, 2002 |
| Copyright © 2001-2016 - Genetic Information Research Institute |
| ISSN# 1534-830X |
| Page 5 |
ATLANTYS3I |
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ATLANTYS3I is an internal portion of the ATLANTYS3 endogenous retrovirus - a molecular fossil. |
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Submitted: 28-Feb-2002 |
Accepted: 28-Feb-2002 |
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Key Words: Gypsy-like endogenous retrovirus; ATLANTYS superfamily; gag; RT; RNase H; integrase; ATLANTYS3LTR; ATLANTYS3I |
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Source: Arabidopsis thaliana |
Organism: Arabidopsis thaliana |
Taxonomy: Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis |
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Authors: Kapitonov,V.V. and Jurka,J. |
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Title: Molecular fossil of the ATLANTYS3 family of endogenous retroviruses. |
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Journal: Repbase Reports 2:(2) p. 5 (2002) |
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Abstract: ATLANTYS3I is an internal portion of the ATLANTYS3 endogenous retrovirus. There are several copies of ATLANTYS3I in the genome; they are over 90% identical to each other. Long terminal repeats are deposited in Repbase Update as ATLANTYS3LTR ATLANTYS3I is flanked by 98% identical LTRs and has 5-bp TSD. Like other members of the ATLANTYS superfamily, ATLANTYS3I encodes s hypotetical protein in reverse orientation, instead of env.
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Derived: Positions 31838 21169 Accession No AC006586 GenBank (rel. 128.0) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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