Repbase Reports

2002, Volume 2, Issue 11
November 30, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 8

GYPSY12A_LTR

GYPSY12A_LTR is an long terminal repeat of the GYPSY12A endogenous retrovirus - a consensus sequence.

Submitted:
00- - 0
Accepted:
30-Nov-2002
Key Words:
endogenous retrovirus; GYPSY superfamily; LTR retrotransposon; GYPSY12A; GYPSY12_LTR; GYPSY12A_LTR
Source:
Drosophila melanogaster
Organism:
Drosophila melanogaster
Taxonomy:
Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
GYPSY12A_LTR, a family of LTRs from Gypsy-like endogenous retroviruses in drosophila.
Journal:
Repbase Reports 2:(11) p.8 (2002)
Abstract:
GYPSY12A_LTR is a long terminal repeat of the GYPSY12A endogenous retrovirus. There are ~20 copies of GYPSY12A_LTR in the genome, they are ~87% identical to the consensus sequence. It is possible that the GYPSY12A_LTR family is a mixture of several young subfamilies. They can be younger than ~8 Myr deducing from the the 87% divergency. The GYPSY12A_LTR consensus sequence is 72% identical to GYPSY12_LTR from GYPSY12.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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