Repbase Reports

2002, Volume 2, Issue 1
January 31, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 59

TC2_FR1

DNA transposon; Pogo-Tc1-IS630 class; Tc2-family; TC2_FR1.

Submitted:
31-Jan-2002
Accepted:
31-Jan-2002
Key Words:
DNA transposon; Pogo-Tc1-IS630 class; Tc2-family; TC2_FR1
Source:
consensus
Organism:
Fugu rubripes
Taxonomy:
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Oncorhynchus; Eukaryota; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Acanthopterygii; Percomorpha; Tetraodontiformes; Tetraodontoidei; Tetraodontidae; Fugu
[1] Authors:
Smit,A.F.A.
Title:
Initial survey of interspersed repeats in Takifugu rubripes.
Journal:
Repbase Reports 2:(1) p. 59 (2002)
Abstract:
TC2_FR1 to 6 are Tc2-like DNA transposons grouping with the Kanga1 and 2 elements that were active in Mesozoic mammals. On average, copies are 3.5% diverged from the consensus. There are at least 82 mutagenic CpGs (4.9% of the dimers), so that the family is actually very young
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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