Repbase Reports

2002, Volume 2, Issue 1
January 31, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 54

TC1_FR1

DNA transposon; Pogo-Tc1-IS630 class; Tc1-family; TC1_FR1.

Submitted:
31-Jan-2002
Accepted:
31-Jan-2002
Key Words:
DNA transposon; Pogo-Tc1-IS630 class; Tc1-family; TC1_FR1
Source:
consensus
Organism:
Fugu rubripes
Taxonomy:
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Oncorhynchus; Eukaryota; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Acanthopterygii; Percomorpha; Tetraodontiformes; Tetraodontoidei; Tetraodontidae; Fugu
[1] Authors:
Smit,A.F.A.
Title:
Initial survey of interspersed repeats in Takifugu rubripes.
Journal:
Repbase Reports 2:(1) p. 54 (2002)
Abstract:
TC1_FR1 to 5 are TC1-like DNA transposon that are spread through the phylogenetic tree of the Tc1-family. Complete open reading frame from bp 148-1188. Its product is very (83%) similar to the transposase of an unreported Tc1 family in Danio rerio (not Tzf or Tdr1). On average, copies are 13% diverged from the consensus.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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