Repbase Reports

2002, Volume 2, Issue 1
January 31, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 53

SINE_FR2

SINE; tRNA; MER6; Mermaid; SINE_FR2.

Submitted:
31-Jan-2002
Accepted:
31-Jan-2002
Key Words:
SINE; tRNA; MER6; Mermaid; SINE_FR2
Source:
consensus
Organism:
Fugu rubripes
Taxonomy:
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Oncorhynchus; Eukaryota; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Acanthopterygii; Percomorpha; Tetraodontiformes; Tetraodontoidei; Tetraodontidae; Fugu
[1] Authors:
Smit,A.F.A.
Title:
Initial survey of interspersed repeats in Takifugu rubripes.
Journal:
Repbase Reports 2:(1) p. 53 (2002)
Abstract:
SINE_FR2 has a separate origin from SINE-FR1a-d, as the tRNA derived region is dissimilar. It matches tRNA-Gly-GGA (83% bp 10-70). The MER6-like region (bases 80-350) is ~84 % similar to that of SINE_FR1. Average substitution level of copies only 3% (including CpGs).
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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