Repbase Reports

2002, Volume 2, Issue 1
January 31, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 48

SENKUSHA2A

DNA transposon; Harbinger/PIF-IS5 class; SENKUSHA2A.

Submitted:
31-Jan-2002
Accepted:
31-Jan-2002
Key Words:
DNA transposon; Harbinger/PIF-IS5 class; SENKUSHA2A
Source:
consensus
Organism:
Fugu rubripes
Taxonomy:
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Oncorhynchus; Eukaryota; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Acanthopterygii; Percomorpha; Tetraodontiformes; Tetraodontoidei; Tetraodontidae; Fugu
[1] Authors:
Smit,A.F.A.
Title:
Initial survey of interspersed repeats in Takifugu rubripes.
Journal:
Repbase Reports 2:(1) p. 48 (2002)
Abstract:
SENKUSHA2A is very young and may still be active; on average copies are 1.7% diverged. There is no long ORF, but BLASTX and wise comparisons show strong homology to the Harbinger transposase. Because the termini are not always complete in each copy, the duplication pattern is unclear.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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