Repbase Reports

2002, Volume 2, Issue 1
January 31, 2002
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 10

CHAPLIN5_FR

DNA transposon; hAT class; MER1 group; CHAPLIN5_FR.

Submitted:
31-Jan-2002
Accepted:
31-Jan-2002
Key Words:
DNA transposon; hAT class; MER1 group; CHAPLIN5_FR
Source:
consensus
Organism:
Fugu rubripes
Taxonomy:
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Oncorhynchus; Eukaryota; Metazoa; Chordata; Vertebrata; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Acanthopterygii; Percomorpha; Tetraodontiformes; Tetraodontoidei; Tetraodontidae; Fugu
[1] Authors:
Smit,A.F.A.
Title:
Initial survey of interspersed repeats in Takifugu rubripes.
Journal:
Repbase Reports 2:(1) p. 10 (2002)
Abstract:
CHAPLIN5 is an autonomous MER1-group DNA transposon. The protein encoded by bp 592-2154 is 60% similar to the Charlie1 transposase Most copies are internal deletion products (CHAPLIN5A) though and bp 592-2154 are not a consensus. On average, copies are 2.2% diverged from the consensus.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute