Repbase Reports

2001, Volume 1, Issue 4
April 30, 2001
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 13

ATHILA8BLTR

ATHILA8BLTR is a long terminal repeat from the ATHILA8B endogenous retrovirus - a consensus sequence.

Submitted:
30-Apr-2001
Accepted:
30-Apr-2001
Key Words:
Gypsy-like endogenous retrovirus; ATHILA superfamily; long terminal repeat; ATHILA8B_I; ATHILA8BLTR
Source:
consensus
Organism:
Arabidopsis thaliana
Taxonomy:
Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
ATHILA8B, an ancient family of Athila-like retroviruses.
Journal:
Repbase Reports 1:(4) p.13 (2001)
Abstract:
ATHILA8BLTR is a long terminal repeat from the ATHILA8B endogenous retrovirus. There are ~10 copies of ATHILA8BLTR in the genome; they are ~95% identical to the consensus sequence. Solo LTRs and proviral copies are flanked by 5-bp target-site duplications. There is a 78% identity between the ATHILA8BLTR and ATHILA8ALTR consensus sequences. See comments for ATHILA8B_I.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Kapitonov,V.V. and Jurka,J.
    ATHILA8B, an ancient family of Athila-like retroviruses.
    Direct submission (December 19, 2001)

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