Repbase Reports

2001, Volume 1, Issue 4
April 30, 2001
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 5

ATCOPIA95LTR

Long terminal repeat from the ATCOPIA95 copia-like LTR-retrotransposon - a consensus sequence.

Submitted:
30-Apr-2001
Accepted:
30-Apr-2001
Key Words:
LTR-retrotransposon; COPIA superfamily; ATCOPIA95 family; RIRE-1 group; long terminal repeat; ATCOPIA95_I; ATCOPIA95LTR
Source:
consensus
Organism:
Arabidopsis thaliana
Taxonomy:
Eukaryota; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Long terminal repeat from the ATCOPIA95 copia-like LTR-retrotransposon.
Journal:
Repbase Reports 1:(4) p.5 (2001)
Abstract:
ATCOPIA95LTR is a consensus sequence of a long terminal repeat from the ATCOPIA95 copia-like retrotransposon. ATCOPIALTR95 copies are ~95% identical to the consensus sequence; ~10 copies of ATCOPIA95LTR are present in the genome. See comments for ATCOPIA95_I.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Kapitonov,V.V. and Jurka,J.
    Long terminal repeat from the ATCOPIA95 copia-like LTR-retrotransposon.
    Direct submission (December 05, 2001)

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