Repbase Reports

2001, Volume 1, Issue 3
March 31, 2001
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 30

ATGP10_I

Internal portion of the ATGP10 gypsy-like retrovirus - a fossil.

Submitted:
31-Mar-2001
Accepted:
31-Mar-2001
Key Words:
LTR retrotransposon; retrovirus; gypsy superfamily; ATGP10 family; gag; reverse transcriptase; ATGP10LTR; ATGP10_I
Source:
thale cress
Organism:
Arabidopsis thaliana
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
ATGP10_I, an internal portion of the ATGP10 gypsy-like retrovirus.
Journal:
Repbase Reports 1:(3) p. 30 (2001)
Abstract:
ATGP10_I is an internal portion of ATGP10, a gypsy-like retrovirus which was integrated into the genome long time ago; its LTRs (deposited in Repbase as ATGP10LTR) are 90% identical to each other. Two ORFs, which have encoded GAG and POL polyproteins, are saturated by false stop codons and frame shifts.
Derived:
Positions 59417 65633 Accession No AC022456 GenBank (rel. 124.0)
Download Sequence - Format:
IG, EMBL, FASTA
References:

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