Repbase Reports

2001, Volume 1, Issue 2
February 28, 2001
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 4

ATCOPIA53_I

Internal region of ATCOPIA53 copia-like LTR-retrotransposon.

Submitted:
28-Feb-2001
Accepted:
28-Feb-2001
Key Words:
LTR-retrotransposon; COPIA superfamily; internal region; copia-like polyprotein; reverse transcriptase; ATCOPIA53LTR; ATCOPIA53_I
Source:
Arabidopsis thaliana
Organism:
Arabidopsis thaliana
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Internal region of ATCOPIA53 copia-like LTR-retrotransposon.
Journal:
Repbase Reports 1:(2) p. 4 (2001)
Abstract:
ATCOPIA53_I is an internal region of the ATCOPIA53 copia-like endogenous retrovirus flanked by the 95% identical ATCOPIA53LTR long terminal repeats, and a 5-bp target-site duplication (AGAAT). The ATCOPIA53_I CDS, which encodes the ATCOPIA53p copia-polyprotein, is slightly corrupted by a few mutations.
Derived:
Positions 156380 161242 Accession No AL161507 GenBank (rel. 124.0)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2019 - Genetic Information Research Institute