Repbase Reports

2001, Volume 1, Issue 1
January 31, 2001
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 10

ATCOPIA50_I

Internal region of ATCOPIA50 copia-like LTR-retrotransposon.

Submitted:
31-Jan-2001
Accepted:
31-Jan-2001
Key Words:
LTR-retrotransposon; COPIA superfamily; internal region; copia-like polyprotein; reverse transcriptase; ATCOPIA50LTR; ATCOPIA50_I
Source:
Arabidopsis thaliana
Organism:
Arabidopsis thaliana
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Internal region of ATCOPIA50 copia-like LTR-retrotransposon.
Journal:
Repbase Reports 1:(1) p.10 (2001)
Abstract:
ATCOPIA50_I is an internal region of the ATCOPIA50 copia-like endogenous retrovirus flanked by 3% divergent ATCOPIA50LTR LTRs and a 5-bp target site duplication. ATCOPIA50_I encodes well preserved remnants of the ATCOPIA50p copia-like polyprotein.
Derived:
Positions 100331 104608 Accession No AL161517 GenBank (rel. 124.0)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Kapitonov,V.V. and Jurka,J.
    Direct submission (August 2001)

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