Repbase Reports

2001, Volume 1, Issue 1
January 31, 2001
Copyright © 2001-2016 - Genetic Information Research Institute
ISSN# 1534-830X
Page 4

ATCOPIA46_I

Internal region of ATCOPIA46 copia-like LTR-retrotransposon.

Submitted:
31-Jan-2001
Accepted:
31-Jan-2001
Key Words:
LTR-retrotransposon; COPIA superfamily; internal region; copia-like polyprotein; ATCOPIA46LTR; ATCOPIA46_I
Source:
Arabidopsis thaliana
Organism:
Arabidopsis thaliana
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; Arabidopsis
[1] Authors:
Kapitonov,V.V. and Jurka,J.
Title:
Internal region of ATCOPIA46 copia-like LTR-retrotransposon.
Journal:
Repbase Reports 1:(1) p.4 (2001)
Abstract:
ATCOPIA46_I is an internal region of the ATCOPIA46 copia-like endogenous retrovirus flanked by 1% divergent ATCOPIA46LTR LTRs and 5 bp-long target-site duplication. ATCOPIA46_I encodes well preserved remnants of the ATCOPIA46p copia-like polyprotein.
Derived:
Positions 179933 184192 Accession No AL161573 GenBank (rel. 124.0)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Kapitonov,V.V. and Jurka,J.
    Direct submission (August 2001)

© 2001-2019 - Genetic Information Research Institute