This is a set of 67 ID sequences used for analysis of RNA-target interactions as described in PNAS, Vol. 94, pp. 1872-1877, March 1997. ID sequences have been replaced by "x", except the poly(A) tail. Jerzy Jurka (jurka@charon.girinst.org) Paul Klonowski (klonowsk@charon.girinst.org) Genetic Information Research Institute 1170 Morse Ave. Sunnyvale, CA 94089 ******************************************************************** ;LOCUS RATREGUC ;DEFINITION Rat gene for regucalcin, partial cds. ; FRAGMENT 3320 -> 3592 D31662 AAGACTAATCCTAACACTGAAGCAGAGATTACTTTAAGAGTCTGAAGACAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAAAAGAG TCTGAAGACAGCTTGGGCTACACAATGAATACTACAACCTTGGATGTAGTATCAGCTTTxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAACTGCAAAAAAGA1 ;LOCUS RATCYSI ;DEFINITION Rat gene for cytosolic sialidase, partial cds. ; FRAGMENT 595 -> 868 D50606 GTGGTTCTCTCAGCCAAGGGTGGTTACTCTGGCTTAAGAAGTTAGCTCTGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAA AAAAAAAAAAAAAAAAAAAGAAGTTAGCTCTGTCAACTCTTTGTCAACCGCAGTCGGCAAGTTATCCCCT GCCTTCCCTGTTCTTTTCTGCAAGTACTTACATCGTTGTTCATTTTCTCACATCCTGAGCCTCC1 ;LOCUS RATCYPOXG ;DEFINITION Rat NADPH-cytochrome P-450 oxidoreductase gene, cap site region. ; FRAGMENT 417 -> 682 J00718 TTGGGACGTTTAAAGATTCTGTTGTGCCTGTTGGCTATTTAGAATTAAGGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGACTCCGAAAAAAAAAACCAAAA AGAAAAAAAAAGAAAAAGAATTAAGGTTCTGTGGTTCTGGTCGGCTGGGGCTAGAGAAGTAGCAATGATT AAGAAGAAGAACCAGAACCTGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTC1 ;LOCUS RATTUBAPS ;DEFINITION Rat alpha-tubulin pseudogene and flanks. ; FRAGMENT 1223 -> 1495 J00799 TCCCCAAGGATGTCAATGCTGCCATTGCCACCATCAAGACCAAGCGTACCxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAAAAAAAAAAAAAAGACCAAGCGTACCATCCAGTTTGTGGACTGGTGCCCCACTGGCTTCAA GGTTGGTATTAATTACCAGCCTCCCACTGTGGTACATGGTGGCGACCTGGCCAAGGTCCAGAG1 ;LOCUS RATACOA2 ;DEFINITION Rat acyl-CoA oxidase (aCoA) gene, 5' end. ; FRAGMENT 340 -> 612 J02753 ACATACATCGTTACAAGGGCAAGTTAGAGTGGTAAAGAAATGTAGTTCTTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCAAAAAAAAAAAAAAA AAAAAGAAATGTAGTTCTTCTCTGGGGCATGAAATCAAATGAAGAAAGAGTGCATTTTACTTAGCACCTA AAGGCTTTTTTTTTTTAAATATTTATTTTTATGTGTACACTATAGCCATCCACAGACACACCA1 ;LOCUS RATODCAA ;DEFINITION Rattus norvegicus ornithine decarboxylase (ODC) gene, complete cds. ; FRAGMENT 114 -> 386 J04792 TGTAAGTAACCAGTCAGTCCCACTTATTCTTTAACAATGTAACTTTGGTGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAAAAAAAAAAAAACC AAAAAAAAAAAAACAAAAAAACAATGTAACTTTGGTGGATACAAATTCACTGCCCAGACTCTTTTCCGGT CCAGACTTCTCAAAGTGACTTAGTTGTAGCTACCCTGAAAGATTTAACAGAATAAGGGACAGC1 ;LOCUS RATGCA ;DEFINITION Rat guanylyl cyclase A/atrial natriuretic peptide receptor (GC-A) ; FRAGMENT 15413 -> 15685 J05677 GTGGAGTTAAACCCTCAGACAGCACTCACCCTTTTGAAATAAGCTCTGTCxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGAAAAAAAAGAAAAA AAAAAAAAAAAAAGAACCAAAAAAAAAAAAAAGAAATAAGCTCTGTCACTGAGGGCCTTTTACACACTAG GGAGACAAAGGACATTGGTTTTAGTTATCTGAACTGATCCAAGCTGAGCTCCATACTGAGTTG1 ;LOCUS RATGCA ;DEFINITION Rat guanylyl cyclase A/atrial natriuretic peptide receptor (GC-A) ; FRAGMENT 17120 -> 17392 J05677 GAAACAGTAGTGTTCTTTCTCTACCTTCTGCTTCCAAAAGAGTTACCTTTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAAAAAAAAAAAGAAA AAAAAAAGAGTTACCTTCAACTTTGTTTCTTTTTCATTGTTGTTGATGTTGTAACTAATTTTAAGCTTTC TTTTTTTTTTTTTTTTTTCCCCTTCTTCTCTGAGCCAGGTGTAGACCTGGCTGTCTTGGAACT1 ;LOCUS RATUG2A ;DEFINITION rat u2 small nuclear rna gene and flanks. ; FRAGMENT 918 -> 646 K00034 GTAAAAACGCTGAACATTTAGGAGAAAGAAAATTTAAAAATAGACAACTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGTTAAAA GAAAAAATAGACAACTAAAATACGTCCTAGTTTACAGCACTTACTCTCAAATATCTTCTATCTAACTATT GTTAGAGCTACCCAGACTAAAGACAAAGCAGTCAGATAACCTGAGATGCTAAAAAGTAAAAGA1 ;LOCUS RATLYSZYM ;DEFINITION Rat lysozyme gene, complete cds. ; FRAGMENT 2363 -> 2092 L12458 TCTCTGTGAGTTTGAAACCAGCCCTATCCTAGATTAAAAAGTTCCAGGCTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGAAAAATAGAAAAGAAA AAAAAAGTTCCAGGCTAAGCAGGGCTACATAGGGAAACTGTGTCTTAGCAAAACAAAACAAAACAAGCAA AAACCCAAAACAACAACAACGAAATTAAAATAACTACGTCTTCCAGGCTTTACCCTTCCCTG1 ;LOCUS RATAST ;DEFINITION Rattus norvegicus aryl sulfotransferase IV gene sequence. ; FRAGMENT 1355 -> 1625 L16241 GCAGAACGACTGGGAGCATTTGCTGCACAGCAAGTTCAAGACTGTGTCTCxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAACCAAAA AAAAAAAAAAAAGACTGTGTCTCACTCAAAAAGACAAAGAAAGAAGGATTGGAAGGGAAAAGGGGTGAGA GGAGGCAGGAACCTTTGGAGTCATCGCGGCTTTGGTTTGTTCTGTTGGGAACTGTAGGACT1 ;LOCUS RATREPEATS ;DEFINITION Rattus norvegicus DNA repeat sequence. ; FRAGMENT 5278 -> 5007 L26461 AGGAACAGGACCCAACTGGTTCCAGAAGACTGATTAAGAACTTAGCCTAAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACAAAAA AAAAAAAAAAAAAAAGAACTTAGCCTAAGGAAATCCAAGGAGGGAGAGATCTGGATGCCTCCACAATCCT GGGACAGCATCCTGGGGTGGTGGGGTTGGGAACTTAAAGAGGAGAGCCAGGTGTAGAGGAGA1 ;LOCUS RAT5HT2X ;DEFINITION Rat serotonin 5HT-2 receptor gene, complete cds. ; FRAGMENT 758 -> 486 L31546 GATGAAAAAGAGGCCCTCTCCCAAGTGGTCCTTAAAGGAAGATAGATGTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGAAAAAAAAAAAAAA AAAAAGGAAGATAGATGTACTCATGACAGATAAGAAAATCGATTATTTCCTGGACATCAGGGATTTTTGG GGGTTCTGTCCACCTAATTTTTCTCTTGTTTATCTTTTACACTCTCAGTTCAGCCACTCCCAG1 ;LOCUS RATIP13DIS ;DEFINITION Rattus norvegicus NADH ubiquinone oxidorectase subunit (IP13) gene, ; FRAGMENT 854 -> 581 L38439 AATTCATAAGAAATTAACTTTAAAATAACCCTTTAGAATGCATGTATGTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACNAA AAAAAAAAAAAAGAATGCATGTATGTAATTTTATTAGTTTTTAAAGACGGAGGCAAGTCAGCATGCTAAG AGAATGATGTCGTGGTGTGTTTTTACATAGAAATTAAATCTTGGGGCTTAGTTGGTGAATGGCT1 ;LOCUS RATEIF2G ;DEFINITION Rattus norvegicus GTP-exchange protein (eIF-2Balpha) gene, exons. ; FRAGMENT 817 -> 1088 L41679 CACGCACATAGACACACAAAAATGAATGTTAAAAAAAGGATAAAGACTCAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAAA AAAAAAAAAAAAAAAAAAAGGATAAAGACTCAAAGAGTCTGGTGGGATGGCTCCGTGGTTCAGGGTGCTT CCAGCCTAATCCCCTGAACTCGATTCCCAGGGCCCACGTGGTTGAAGCAAAGAAGCGACAGC1 ;LOCUS RATEIF2G ;DEFINITION Rattus norvegicus GTP-exchange protein (eIF-2Balpha) gene, exons. ; FRAGMENT 6002 -> 5733 L41679 CTGCTGACCTTAAGAGTAAGAAGCAAACGCATTTTAAAAAGCAGCTTTTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCCGAAAAAAAAAAAAGCAG CTTTTAAAGTTAAAAAGGGACAAATGTTGCTAGGGATAGAGAAGATAATACTTCCTTACTGTTGGCAGGG ACATACCTCTCCCATTTTAAAAACAGCTATTGGTGCACAAGGCATAGAATTTAGGGGCTA1 ;LOCUS RATMT12C ;DEFINITION Rat metallothionein-2 and metallothionein-1 genes, complete cds. ; FRAGMENT 6524 -> 6260 M11794 ACCTTTAGCCATCGGCTCTACTCCAGGCCGGTTTTAAAAACCGAGGCAGAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAACCGAGGCAGAGGGATCATTTTAGGTGATATCCAGGGACTGCATTAG ATAAAACAAAACAAAACAAATAAACAAAAAAAAAAAACAAAAAACAAAAACCAAA1 ;LOCUS RATMT1PA ;DEFINITION Rat metallothionein-1 pseudogene a (MT-1-pseudo-a). ; FRAGMENT 1663 -> 1401 M11796 AAGTACCAGAGTCACAAATAAGCATTGAGAATCTGTTATTGAAATGTCTGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAGAAAGAAAAAAAAxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGA AAAAAAAGAAAGAAAGAAATGTCTGAGCCTGTCACTATTTTTCTAATAATTTG1 ;LOCUS RATCYPPB ;DEFINITION Rat cytochrome P450 PB1 (PB1 allele) mRNA. ; FRAGMENT 1421 -> 1605 M13711 TGCCACCATTTTATGAGCTGTGCTTCATTCCTCTCTAAAGAGATCAAATTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAAAA AAAAAAAATAAATAAATAAATAAAGAGATCAAATTGCCTGGCAAA1 ;LOCUS RATABPG ;DEFINITION Rat androgen-binding protein gene, complete cds. ; FRAGMENT 3266 -> 3005 M19993 AAAAAAAAAAAAGAACCAAAAAAAAAAAAAAAAAAAGATTTGGGTTTTATxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAAGAAAAGGAAAAAAAACA AAAAAACAAAAAAAGATTTGGGTTTTATGGAGAGGTGAGCATAGTGTTTAAGAGAGACAGCAGAAGGCAG AGCTGGCCTTGGAGGAGAAAGAGACTTTCAAAAGTCTACCTTGGAGACTGAA1 ;LOCUS RATHPA1 ;DEFINITION Rat haptoglobin (Hp) gene, exons 1,2 and 3. ; FRAGMENT 556 -> 825 M34230 GTCTGAGTTAAGGGCTGGGTCACAAGGGTGTTTAAAAAAAAAAAAAAAGAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAAAAAAGACCAAAAAAAA AAAAAAAAAAAAAAAAAAAAGAGAGGTCTCGTCCCTCTCCCAGTTAAGTATCAGATTAACAGCCCCTATT CCCCGTCCCACTCTCTGGGGTTATCACACTGCGGTGGGTGGGAGGGGTCGTGAAGTTGCT1 ;LOCUS MARB3 ;DEFINITION Woodchuck hepatitis virus core antigen and surface antigen (preS) ; FRAGMENT 69 -> 336 M60764 TCCTGCCTCAATTTCAAAGACAAGATACTATTTTTTTAATGTTTTTAGTTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACACTACATAAAAATTAACAAA TAAAATAAAGGCGGTCTGCCCATCCACAACTACAAAAAAATTTTTTAATGTTTTTTTTAGTTATAGATGG ACACAATACCTTTATTTTATTTATTTAGCTGAGGATTGAACCCGGTGCCTCACCTGTG1 ;LOCUS RATRASPHA ;DEFINITION R.norvegicus proto-Ha-ras gene, exon 1 region. ; FRAGMENT 603 -> 332 M61016 GGCATCTTGTTCAGTATCCCTAGCTTCACAGCCTTTAAAAAAAAATTCTTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAACCAAA AAAAAAAATTCTTTATCTTATAAGCACGTGCGTGTGCACGTACGTACGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTAATGCCCTCAGAGGCCAGAGAAGGGCATCTGATCC1 ;LOCUS RATPRSTTNC ;DEFINITION Rat prostatein C3 subunit gene, complete cds. ; FRAGMENT 6208 -> 5936 M71245 CACATCAATTAAGAGGAAACCACTGAGCTGAGTTGAAAAAAAAATGGTTTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAATGGTTTAATTCCAGAGTCTCCTGGCATTTCATGAGATAC AATATTTTTCCAAGCCATGTATGTGTCAGACGTGGAGCCTAAACACAAGAGTTTAAGTAGGTA1 ;LOCUS RATDNA ;DEFINITION Rattus norvegicus DNA. ; FRAGMENT 3365 -> 3101 M75151 AATGTGTGACTCACAAAGCCCAGAAGCTAGAAATAAGAAAATACCATTTCxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCCGGAAAAAAAAGAACCAAAAAAA AAAAAAAAGAAAATACCATTTACCATTTCACTTTATTTTTTAAATGCATCTTACCCATTTGTTTACAGCG TTTATCTTGTACTTTTTCAGTGCATTTCTCAAGTTCAGTTTCTTAACCTCATGAT1 ;LOCUS RAT6PTHS ;DEFINITION Rat 6-pyruvoyl-tetrahydropterin synthase mRNA, complete cds. ; FRAGMENT 972 -> 1176 M77850 TTCCTACATTTAAGAAAATACATAAATAAGTTTCAAAAATTATTTCATCTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAATTATTTCATCTGAGCAAAATGTTTTGATGTGGAATTATGTAAAGGTAAAATAAAC1 ;LOCUS RATCTTG ;DEFINITION Rat troponin T cardiac isoform gene, complete cds. ; FRAGMENT 5403 -> 5131 M80829 GTAAAAATGTTCACGAGGGATCCGTATTGGGTTTTTAAAAATGTATTTGTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAAATGTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCACAGCATACA TGAATGTCACAATACATGCGTGGAGGTCAGAGGACAACGGATTTTTGTCTTCTACCTTGTAGG1 ;LOCUS RATAADC01 ;DEFINITION Rat (clone pSHCF101) liver-specific aromatic L-amino acid ; FRAGMENT 859 -> 589 M84648 CCACTAAGTGATTCATAACTCCAACCCCTGTATCAGAAAAAGGCTGTCCTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCCGAAAAAAAAAAAAGAA GAAAAAAAAAAAAAAAAAAAAAAGAAAAAGGCTGTCCTATTGAAGAACCTTCCCTCTGTCCAGAGCCTTT AAATTGCCAGCATTTCATGGGGTCTCTAGAGCCAGACAATGGGCAGAGCCCACCTGCTAGC1 ;LOCUS RATFASYN ;DEFINITION Rat fatty acid synthase gene, complete cds. ; FRAGMENT 13304 -> 13033 M84761 CAGCGAGACAGCTGGGTAGTTAACAGTGCTTCTATCAAACCTGATGACCCxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAACCAAA AAAACAAAAAAAAACCTGATGACCCATGGAGGAGAACCAACTCCTGCAAGTTGTCCTCTGGTACCCACAC ATGCCACTCACAACCATCAAAAGTAAGTAAATATAATTAGAAAAAAAATGCACTACAAAAGG1 ;LOCUS RATPRPPA ;DEFINITION Rat proline-rich protein (PRP) gene, 5' end, and containing several ; FRAGMENT 531 -> 259 M86526 GAAATTGCTTTTTGAAGATCTAAATCTGCCTGTTAGAAATGCCCACTACTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGAAAAAAAAAAAAAA GAAAGAAAGAAATGCCCACTACTGCAAGGGAGACTGGCCGTATGGTGTGTCACAGTGGGATTCCTTTGGA CAAGCAGGAAGCACAGCTTACCATAATTATTTCTCGCAGTCTTCCTTCATGAAGAGAAAAATG1 ;LOCUS S76401S2 ;DEFINITION beta -HKA=H,K-ATPase beta-subunit [rats, Genomic, 8983 nt, segment ; FRAGMENT 706 -> 434 S76404 TGGATATATCTGCCTAGCCTACCTAGTCCATACTTAAGAACCATAGCTACxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAAAAAAAA AAAAAAAAGAACCATAGCTACACAGGGCACTTCAGATACAGCCTGGAAATTGGGCATCTCCAGATGTGCC TGGCATATTAGAGTCATGGCAACTCTCACACCAGAATAGGATCAGTGAAATAAACCCCTGCCT1 ;LOCUS RRU01962 ;DEFINITION Rattus rattus Sprague Dawley cholesterol 7-alpha-hydroxylase gene, ; FRAGMENT 4786 -> 5058 U01962 CTCAGAATGCCAATATTTTAAATTATGTAGGTTGTTAAAACTTTAGTGCTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGAAAAAAAGAAAAAGA AAAAAAAAAACTTTAGTGCTGTAGCCCTTTCTGTTATTTGATGTTTCACATCTGTTAAAAAACAAAACAA AACAAAAAAAACAAGCAAATGGAACATTTTAGGCATTCTTTGGGGGAAATGATTCTTAGAGCA1 ;LOCUS RNU03026 ;DEFINITION Rattus norvegicus proenkephalin gene, 5' region. ; FRAGMENT 123 -> 395 U03026 TTAACCTGCCCATGCCTCATTCGGTCGATCAGCCAATAATTAACCATGCTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTAACCATGCTGTA GCCAAGCTATCTGAACTGGACAGGTCTGGGAACTTCTAGGAGCATCCTTGTTTGTCTCTCCTG1 ;LOCUS RNU04843 ;DEFINITION Rattus norvegicus Sprague-Dawley preproepidermal growth factor ; FRAGMENT 401 -> 129 U04843 GGGAAAGGTGTGGACTGTTATGACTGAACTGGATTAGAAAGAGAATACACxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGAAAAAAGAACCAAA AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAGAATACACGGGAATTGTGTCAGAGTGGGAA TCCTTCTCAGACAACTCTGGCCGTCTTATCACGCCTCGGTGATAGGAAACAATAATTTGGTTC1 ;LOCUS RNU05013 ;DEFINITION Rattus norvegicus Sprague-Dawley heme oxygenase-2 non-reducing ; FRAGMENT 4938 -> 4668 U05013 TGAATTAGAATGGTGTAACCAAAAAACTAGTTAAGATATGTCCTCAACTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACCGAAAAAAAGAACCAAA AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGATATGTCCTCAACTAACAACAAGGAAGTCAGTCCTTGA CCCTTCTGCTATCACAAGTTCCAGAAAGTCACTTCTGTGCCCCTCCCCGTTTAAAACACTG1 ;LOCUS RNU05013 ;DEFINITION Rattus norvegicus Sprague-Dawley heme oxygenase-2 non-reducing ; FRAGMENT 5777 -> 6048 U05013 CTGGAGGATTGAGATTGAAAGTCATCTGGGTTACCTTTAAAGGACGGGCAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGAAAAAAAGAAAAGGGG GGGAAAAAAAAGGACGGGCAAATAGATCTCTGTGAGTTCAAGGTCATACATGGTTCCAGGATGCCAGAGG TACAGTGTAAGACCCTCTCTCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA1 ;LOCUS RNU07796 ;DEFINITION Rattus norvegicus lung surfactant protein C (SP-C) gene, complete ; FRAGMENT 356 -> 627 U07796 CACTCATCCACATGAAATAAAAATAAATAACTCTTTAAAGGGGAATTGGAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGAAAAAAAAAAAAAAA AAAAGGGGAATTGGAGAGATGTATGCCAACCCCAAGTTGGAAGGTAGAGGCAATTCTAAATCACTGGTAG GTGTGATGTAATACCCAAAGCACAGAAGAGGATTTGGGGAAAGAGAGAAGACAGGGATGGGG1 ;LOCUS MMU12235 ;DEFINITION Mus musculus 129/SvJ urokinase-type plasminogen activator receptor ; FRAGMENT 2903 -> 3175 U12235 GGACCTAAATGGGACCCAGGGTAGAAAGTCCTTTCAAGAACTAGAAAGAAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGAAAAAAAAAAAGAC AAAAAGAACTAGAAAGAAGAAGAGTTAGAGGTTGGGAGATGGGGCGGGGGGGGGGGTCGCATGCCTTTGA TTCAAGCATTAGGGAGACAGAAGTGGGTGGATTTCTGTGAGTTCAAGGCCTCCATCCTGGTCT1 ;LOCUS RNU19511 ;DEFINITION Rattus norvegicus initiation factor-2Be gene, complete cds. ; FRAGMENT 3024 -> 2752 U19511 TGTCTATGGACATAATGCTGGCATTTCAAATTCACTGGTAAAAAAATTTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAACCAA AAAAAAAAATTTAAGGGATCTTCTTTGGTTCTTTGATTTGTAATGTTTGAGACATGGTCTCATGTAACCC AGATTACCTTCCAGATTACAAGATAGCCAAAGATGACCTTAAATGTCTCATTTCTCTCTGTTA1 ;LOCUS RNU24154 ;DEFINITION Rattus norvegicus Fra-1 (fra-1) gene, partial cds. ; FRAGMENT 188 -> 458 U24154 CTAAACAGACCTCACACCTCCTTCCAGAGCGGTCTTAAGACAGGACAGCAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAGGGGGAAAAAAAAAAA AGACAGGACAGCAGACTTGGGTGACAGTTGGAATGATTCCTGCCAGGTAAATGGTGGTGGTGGTGGTGGT GGTGATGATGATATTATAAATAACCCATATTTATAATTCACAGTTTTCAGACACTTTTCCG1 ;LOCUS RNU24154 ;DEFINITION Rattus norvegicus Fra-1 (fra-1) gene, partial cds. ; FRAGMENT 2752 -> 3023 U24154 CCCAGCTCCGAAAAAAAAAGAACCAAAAAAAAAAAAAGAGTTTAGGTCTAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAAAAAAAA AAAAAAGAGTTTAGGTCTAGCCTAAGCTACATGATTACCTTCCCCCCGACCCCCAACAACAAATTCTCTT ACTTGATTCTCAAAGTTGCCTTGGGAGCTCGAAGCTGAAAGTATGTTCGTCTTCGAGGATGG1 ;LOCUS RNU24172 ;DEFINITION Rattus norvegicus p21 (WAF1) gene, partial promoter sequence. ; FRAGMENT 1108 -> 839 U24172 CTGACACGTATAAAACTTCTCCAGCCTCAGCTCCATCGTTAGAAATTTATxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNTNCGAAAAAAAGAACCAAA AAAAAAAAAAAAAAAAAAAAGAAATTTATTCCTGGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAA1 ;LOCUS RNGLYT2 ;DEFINITION Rattus norvegicus glycine transporter (GLYT-1) gene, exons 2-4 and ; FRAGMENT 3751 -> 3480 U28975 TTCTCAGCAGGAAAGGTCTGGGTCCTCTTTGGGTCTTAAGACAGAGTCCAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAAA AAAAAAAAAAAAAAAAAGACAGAGTCCACCCTATTGAGTGTGCAGGTGTGGTGATGTCCCTTCGGTGTGT AGAACCCTGATTTCACACTGGCCCAGGTACATGTCTTCCCACCAACAGGAGGTAGGATGGGT1 ;LOCUS RNCALP ;DEFINITION Rat calmodulin pseudogene (lambdaSC9) and flanking regions. ; FRAGMENT 1385 -> 1657 X04271 AGCTTGGTGATTGAGCACAGTCAGGCCTTTGTATTAAAACTGAAAAATGGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAAAAAAACTGAAAAATGGAAAAGACAAATTCAAACTCTCAGATGGCTTCTAGTTCAACTGTT CAGATAAATCTCAGCAGCCAGTTTACCGCAAACAAACATTTAAAATTGGTTTACCTCAGGATG1 ;LOCUS RNGAMT ;DEFINITION Rat gene for guanidinoacetate methyltransferase (EC 2.1.1.2). ; FRAGMENT 37 -> 309 X08056 CTCTGCACAACACCCATGTACATTTAAAAAAAATTAAGAAACAAACCAAAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGAAAAAAAGAACCAAA AAAAAAAAAAAAGAGAGAGAAACAAACCAAAAACCCCAAAACAAAAGTGTTAACTGTTTCAATTCTAAAC TGGAGGCCCTGGTCTCCACTCCTGGTTTTTAGCAGTTTTCCCTGCCTGTAAAATGAGAGTACT1 ;LOCUS RNCAMIII ;DEFINITION R.norvegicus CaMIII gene for calmodulin III. ; FRAGMENT 4421 -> 4691 X14265 CCCAAGCCAGATCTTAACTAGCCCCTGCACCTCATGAAATGTGTGTCCATxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCCGAAAAAAAAAAAAGAA AAAAAAATGTGTGTCCATCATGTATGTCTCATGTCACCTCAGGCCAGGTCTGTGGCTTGCATGTTGGTAT GTGTGTGGAGAAGAGCTTAGCCAGGAACTGCCACACCTACCCCATAGCCCTGCCACAGACC1 ;LOCUS RNAPH ;DEFINITION R.norvegicus gene for acyl-peptide hydrolase. ; FRAGMENT 7794 -> 8067 X14915 CCTTTTCTGCCTTCTGCTGGACTTAGTTTTCCTTAAGAGGACCAAATGTTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAAAAA AGGAAGAGGACCAAATGTTTCTGATGCCCCACAGAAGAGCCCCAAGCTTTGGGGTTGTCTCTGAGATGGG TCCCTGAACACTTGGTAATGGCAGTTGATGGAGACAGGATGGGCCCTTGAGGGATGATGTGCCG1 ;LOCUS RSIID4G ;DEFINITION Rat P450 IID4 gene. ; FRAGMENT 7596 -> 7324 X52029 CCCATGAGCCTGAGGGAAGTCATGAGCCATGCAGGGAGGAATGGGGGGGGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGAAAAGAAAAGAAAA GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAATGGGGGTAACAGTGTCAGGACTGTTC CCTTTCTACTTTCGATGTTTCTCCAGTCTACAGAACTGACAGAATCATATAGAAAGGCACACG1 ;LOCUS RNH1D2B ;DEFINITION R.norvegicus genes for H1d-histone and H2B-histone. ; FRAGMENT 1996 -> 2268 X67320 GCGTCTCGTCCAAGGCCATAGGCATCAACTACATATTAAAGCGGATTGCCxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAACAGAATAGAG AAAAAAAAAAAAAAGCGGATTGCCTGTGTGGTGCGGCACTTACAAATAGCGCGTGACCATCATATCTCAG TTGATCCAGCCGACCATTCTCGTGCATTGCCCAGGAAGCTGGCCAAGCACCAAGAGTGTCACC1 ;LOCUS RNGABAARD ;DEFINITION R.norvegicus gene for GABAA receptor delta subunit. ; FRAGMENT 1047 -> 1317 X69986 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAAAAAGAAAA GAAAGAAAGAAAGAAAGAAGAAGAAGAAGAAGAAGAAGACGACAGGGGAGAGGAGAGAGGGGAGAGAAGA GAGAGGGGAGAGGAGAGAGGAGAGAGGAGAGGGGAGAGGGGGGAGAGGAGAGAGCCTAAGT1 ;LOCUS RNCOX6A ;DEFINITION R.norvegicus cox VIa gene (liver). ; FRAGMENT 2276 -> 2004 X72757 TGATACAATTTAAGGAGCAAATAAACAGCCTTGTTAAAAATTCATCGAGAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGAAAAAAAGAACCAA AAAAAAAAAAAATTCATCGAGAGACATTAAAACTGTCTACACAAACCGGCAGTCTGTGCTCAAGCCTAAC GCCCGGATTGTAAATCACCTTCAGGATCTGCCTCTATAAAAGGACACCCCAAAACTACAAGCT1 ;LOCUS RNLTPKG ;DEFINITION R.norvegicus erythroid-specific enhancer in L-type pyruvate kinase ; FRAGMENT 464 -> 728 X85791 CCTGGCTAGATTCTTTTTTCTTTTAAGTAACATTGTAAAAATGTATTCGTxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCCCAAAAAAAAATGTATTCGTTT GTGTTGGGGGAGGGGCGCACTGTGCCACTGCAGGGTGTGGAAGTCAGAGGACATTTGTGGGAATCCGTTC TCTCCTTTTGCTATGTGGGTTTGGAGTCGAGCTCAGACTTGGAGCTGCTTCCAGG1 ;LOCUS RNLFIB ;DEFINITION Rat gene for alpha-fibrinogen. ; FRAGMENT 5984 -> 6256 X86561 GAAATGTGAAGGAAATTCTTGAAGGGTCAATTGTGTATTTGAAAAGAACAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAAAGAAAAGAAAAAAAAAAGAAAAGAACATAGTCTGATCGGTCTGCTCACCACATGCCGAGA CCTTGGCCTTAGCATCACCTAGGCTCTTCAGGCAGGGCTAACAGTAAGATTAGTGCCTTCCTC1 ;LOCUS RNMAFAEX2 ;DEFINITION R.norvegicus MAFA gene, exon2. ; FRAGMENT 1003 -> 731 X97192 ACACATACATATTCTAGATTGGGAACTGGAAGTTAAGAAAAGCTTCCTGAxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAGAACCAAA AAAAAAAAAAAAGAAAAGCTTCCTGAGTCTCACTAAGTTTAGGTAACTTCCTGAGGGAAGGCTGTGTATG TGTGCACAAGCACCAGGGTTGAAGTTTTCAAGACTGAGGTGTCAAATTGCATTTGGTGGCCTC1 ;LOCUS RNTM4 ;DEFINITION Rat TM-4 gene for fibroblast tropomyosin 4. ; FRAGMENT 13288 -> 13016 Y00169 ATCAAGGGCTGACTCAATTTCAGACACTCTCCATTAAGAAACAATGACTGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAAAAAA AAAAAAAAAAGAAACAATGACTGCACTGCCATCCTGGTGAGCTAGTGTTGTGTTTGAGGAACCATGCTAG ATTGTCTCCTTATTTTCAGAAAAGGACCAGTGGGCCTCAGTTTTCTTTTGGTAAAGAGAGTTT1 ;LOCUS RN5CATOMT ;DEFINITION R.norvegicus upstream of gene for catechol methyltransferase. ; FRAGMENT 1936 -> 1664 Z12652 CTCCAAAAGGACAGCGGGCAAGGCTGAACTGGACGCAAAAGTGAGCTCCGxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGAAAAAAAAGAACCAA AAAAAAAAAGTGAGCTCCGGAGTCATATGGCAGATGGCATCTTCCCTAGACCCCATAGCATCCATTTAGT GTGTTCATTAGATTCCTGCTCTCTGCTTGCCCTGTTCCAGACAATAGAAAGGAACCAAAACAG1