LOCUS       8813_SP            1268 bp    DNA     linear   INV 01-APR-2005
DEFINITION  Strongylocentrotus purpuratus RAG1 core-like pseudogene (8813_SP),
            genomic sequence.
ACCESSION   
VERSION
KEYWORDS    .
SOURCE      Strongylocentrotus purpuratus
  ORGANISM  Strongylocentrotus purpuratus
            Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa;
            Echinoidea; Euechinoidea; Echinacea; Echinoida;
            Strongylocentrotidae; Strongylocentrotus.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Kapitonov,V.V. and Jurka,J.
  TITLE     RAG1 core and V(D)J recombination signal sequences were derived
            from Transib transposons
  JOURNAL   PLoS Biol. (2005) 3, e181.
COMMENT     This sequence encodes remnants of
            the RAG1 core-like protein.
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Strongylocentrotus purpuratus"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:7668"
     gene            <1..>1268
                     /gene="8813_SP"
                     /pseudo
     CDS             <1..>1268
                     /gene="8813_SP"
                     /note="This is a putative pseudogene, it contains several
                     stop codons and frame shifts. [intronless gene] ; RAG1
                     core-like/Transib transposase"
                     /pseudo
                     /codon_start=1
                     /product="8813_SP"
BASE COUNT      357 a    266 c    321 g    324 t
ORIGIN      
        1 gaggcaatcg ctgacgagaa caatcgctct tcatctattc ttctactgga agggatagag
       61 tgcgagaggg ccacaagggg actttcggtg aacatcagaa agacatggag gaggcacaat
      121 cttcggtttt ataattccat gattgacgag aaacttgaca gggcagatgg tggcctccag
      181 ggtagtagtt ctaaattctt atgtactttg tgccatgcta cccgagagac agcgaagtca
      241 gaaatgggca gtttcaggat taccaggaca ttcgaggaga cggatgccaa agctaactac
      301 atgctgatta accctgatga ccgtctccag aaggaggtgg agatcattag atcagaggga
      361 aaggattcta aaagtgtttg ttgatgtttc tttttccatc agatcatcaa tgcttatttg
      421 catctattga tgactaaaaa caaccaaagt gactttggtc acatcttcat gttaccatca
      481 tatggagctg tccagtggag ctgtcagggt atgcaaccat ggatgtttaa gaaggtaagt
      541 tgtcgttgtt gaaaacccag atgacctgac ttggcacaat gtcacaaggt gtgaaatctc
      601 gtccagttct gcaatctgat ccgcgagaga agctgataga tgctacccat gcggacataa
      661 acatcggctc gttttttaag aagctgatca tatgtgaaac cgccagaatc cagacatggg
      721 aaattcgtca agatgtgaag gggtgttacg agatcccgag aagatgtttg attatcattt
      781 gttgtccacg cttggactag gtccctcctt gatgatgcct ggttttttcg cgcggacatc
      841 gttcgccctg aaaaacaatg acattgtctt acagctaatc gaagatgagc aaaggtgagc
      901 aaaggcgaga aaagctgaaa gaagtgttgg ttctgttctc tcgcctccgg tctgtttaca
      961 gagcgcatca ccgcaaggta gacgaggtca aggtctacga ggcaaacgca atcatcatga
     1021 ggaacctgtt gaagactcac tttgcatatg tctcctggcc caattatctt cacaaagtca
     1081 tagaacatgt tcaggagatc cttgaggatc caagcggacc acagacattt ggagggttga
     1141 gtggagaagg gaatgaagcc tccaacaagc tcttccgcga tctccgtcgg cattatgcta
     1201 ggaagcatga tgtgacgcag aatctccgtg acatcctgtg ggtacactgg ctcttcacca
     1261 gtcctaaa
//