Flanking repeats and the adjacent regions in rodent ID elements listed in ID.JME file. 5' adjacent 5' flanking repeats 3' flanking repeats 3' adj tggttactctggctt AAGAAGTTAGCTCTG..........................AAGAAGTTAGCTCTG tcaactctttgtcaa gcctgttggctattt AGAATTAAGG....................................AGAATTAAGG ttctgtggttctggt gccattgccaccatc AAGACCAAGCGTACC..........................AAGACCAAGCGTACC atccagtttgtggac gcaagttagagtggt AAAGAAATGTAGTTCTT......................AAAGAAATGTAGTTCTT ctctggggcatgaaa tcccacttattcttt AACAATGTAACTTTGGTG....................AACAATGTAACTTTGGTG gatacaaattcactg agcactcaccctttt GAAATAAGCTCTGTC..........................GAAATAAGCTCTGTC actgagggcctttta ggagaaagaaaattt AAAAATAGACAACTA..........................AAAAATAGACAACTA aaatacgtcctagtt tgatttttaacctct AACAGTTACAGCCT............................AACAGTTACAGCCT tgggctactcatcta cacacagacgtcgtc AAGATGGCTCAGTAGA........................AAGATGGCTCAGTAGA tgaaggcgcctgtcc gccctatcctagatt AAAAAGTTCCAGGCT..........................AAAAAGTTCCAGGCT aagcagggctacata ctgcacagcaagttc AAGACTGTGTCTC..............................AAGACTGTGTCTC actcaaaaagacaaa tccagaagactgatt AAGAACTTAGCCTAA..........................AAGAACTTAGCCTAA ggaaatccaaggagg tcccaagtggtcctt AAAGGAAGATAGATGTA......................AAAGGAAGATAGATGTA ctcatgacagataag aagaagaaccaattt AAAAACACAGTAGAG..........................AAAAACACAGTAGAG ctggagggatggttt ttaaaataacccttt AGAATGCATGTATGTA........................AGAATGCATGTATGTA attttattagttttt acaaaaatgaatgtt AAAAAAAGGATAAAGACTCA................AAAAAAAGGATAAAGACTCA aagagtctggtggga aagcaaacgcatttt AAAAAGCAGCTTTTA..........................AAAAAGCAGCTTTTA aagttaaaaagggac caaggtttatttatt TAAACATTAAACATT..........................TAAACATTAAACATT aat tgagaatctgttatt GAAATGTCTG....................................GAAATGTCTG agcctgtcactattt acctttacctttctt AAGATTTCTCACAG............................AAGATTTCTCACAG ctacttctttagtct accaaaaaaaaaaaa AAAAAAAGATTTGGGTTTTAT..............AAAAAAAGATTTGGGTTTTAT ggagaggtgagcata tcctcctcaggcctt AAGATTTGGGTTTT............................AAGATTTGGGTTTT at ccgaattctctt AAAAGAACAAATAAC..........................AAAAGAACAAATAAC aaagtttgtgtgtgt gtcacaagggtgttt AAAAAAAAAAAAAAAGA......................AAAAAAAAAAAAAAAGA gaggtctcgtccctc ccctta GAGCCCAAGGG..................................GAGCCCAAGGG tgggtcaaaggcagc agatactattttttt TTTTAATGTTTTT..............................TTTTAATGTTTTT atagatggacacaat agcttcacagccttt AAAAAAAAATTCTT............................AAAAAAAAATTCTT tatcttataagcacg actgagctgagttga AAAAAAAATGGTTT............................AAAAAAAATGGTTT aattccagagtctcc aagctagaaataaga AAAATACCATTT................................AAAATACCATTT actttattttttaaa acataaataagtttc AAAAATTATTTCATCT........................AAAAATTATTTCATCT gagcaaaatgttttg ccgtattgggttttt AAAAATGTATTTGT............................AAAAATGTATTTGT gtgtgtgtgtgtgtg gtttgcttgcttctt AAAAAAGTTGTTTACC........................AAAAAAGTTGTTTACC atctgactgcctctg tccaacccctgtatc AGAAAAAGGCTGTCCT........................AGAAAAAGGCTGTCCT attgaagaaccttcc aacagtgcttctatc AAACCTGATGACCC............................AAACCTGATGACCC atggaggagaaccaa ctaaatctgcctgtt AGAAATGCCCACTACT........................AGAAATGCCCACTACT gcaagggagactggc acctagtccatactt AAGAACCATAGCTAC..........................AAGAACCATAGCTAC acagggcacttcaga attatgtaggttgtt AAAACTTTAGTGCT............................AAAACTTTAGTGCT gtagccctttctgtt ttcggtcgatcagcc AATAATTAACCATGCT........................AATAATTAACCATGCT gtagccaagctatct ttatgattgcttctt AAAAATTAATGACTT..........................AAAAATTAATGACTT actgaactggattag AAAGAGAATACAC..............................AAAGAGAATACAC gggaattgtgtcaga accaaaaaactagtt AAGATATGTCCTCAACTA....................AAGATATGTCCTCAACTA acaacaaggaagtca atctgggttaccttt AAAGGACGGGCA................................AAAGGACGGGCA aatagatctctgtga aataaataactcttt AAAGGGGAATTGGA............................AAAGGGGAATTGGA gagatgtatgccaac gtagaaagtcctttc AAGAACTAGAAAGAA..........................AAGAACTAGAAAGAA gaagagttagaggtt ttcaaattcactggt AAAAAAATTTA..................................AAAAAAATTTA agggatcttctttgg tagtatttatattaa AAAAAAAAAAAG................................AAAAAAAAAAAG aaaaaaaaaaggcac ttccagagcggtctt AAGACAGGACAGCA............................AAGACAGGACAGCA gacttgggtgacagt gaaaaaaaaagaacc AAAAAAAAAAAAAGAGTTTAGGTCTA....AAAAAAAAAAAAAGAGTTTAGGTCTA gcctaagctacatga gaaccaaaaaaaaaa AAAAAAAAAAAAAGAAATTTATTCCT....AAAAAAAAAAAAAGAAATTTATTCCT ttgaggctcagctgg ctcagctccatcgtt AGAAATTTAT....................................AGAAATTTAT tcct taagtatgacaaaaa TAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAGTAAG taagtaaataaataa agtaagtaagtaagt AAGTAAGTAAGTAAGTAAGTAAGTAAG..AAGTAAGTAAGTAAGTAAGTAAGTAAG taaataaataaataa tcaggcctttgtatt AAAACTGAAAAATGG..........................AAAACTGAAAAATGG aaaagacaaattcaa atttaaaaaaaatta AGAAACAAACCAAA............................AGAAACAAACCAAA aaccccaaaacaaaa cccctgcacctcatg AAATGTGTGTCCAT............................AAATGTGTGTCCAT catgtatgtctcatg ggtgaacttcagatg AAGAATCGTCTT................................AAGAATCGTCTT gagacttacccactc gacttagttttcctt AAGAGGACCAAATGTT........................AAGAGGACCAAATGTT tctgatgccccacag agccatgcagggagg AGGAATGGGGG..................................AGGAATGGGGG taacagtgtcaggac catcaactacatatt AAAGCGGATTGCC..............................AAAGCGGATTGCC tgtgtggtgcggcac aagaagaagaagaag AAGAAGAAGAAGAAGAAGAAGAAG........AAGAAGAAGAAGAAGAAGAAGAAG acgacaggggagagg ataaacagccttgtt AAAAATTCATCGAGA..........................AAAAATTCATCGAGA gacattaaaactgtc tttaagtaacattgt AAAAATGTATTCGT............................AAAAATGTATTCGT ttgtgttgggggagg gtcaattgtgtattt GAAAAGAACA....................................GAAAAGAACA tagtctgatcggtct cagacactctccatt AAGAAACAATGACTG..........................AAGAAACAATGACTG cactgccatcctggt gtacatttgttactc AAAAAAAAAAAA................................AAAAAAAAAAAA ggctgaactggacgc AAAAGTGAGCTCCG............................AAAAGTGAGCTCCG gagtcatatggcaga