;ID VANDALNX1 DNA ; ATH ; 1728 BP ;XX ;DE Nonautonomous DNA transposon VANDALNX1 - a consensus. ;XX ;AC . ;XX ;DT 22-SEP-2000 (Rel. 5.9, Created) ;DT 22-SEP-2000 (Rel. 5.9, Last updated, Version 1) ;XX ;KW Nonautonomous DNA transposon; VANDAL superfamily; VANDALNX1. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Charophyta/Embryophyta group; ;OC Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; ;OC Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; ;OC Arabidopsis. ;XX ;RN [1] (bases 1 to 1728) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (September 2000) ;XX ;CC VANDALNX1 is a nonautonomous DNA transposon. Its copies are ;CC flanked by 9 bp target site duplications. ;CC There are 3 copies of VANDALNX1 in the genome, they are ~97% ;CC identical to the consensus sequence. ;CC Both ~80-bp 5'- and 3'-termini of VANDALNX1 are 70-75% identical ;CC to the corresponding termini of VANDAL10, VANDAL11 and VANDAL12. ;CC Therefore, it's likely that the unknown autonomous element, which ;CC was directly involved in transposition of VANDALNX1 copies, was ;CC similar to VANDAL10-VANDAL12 transposons. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 1728 BP; 684 A; 272 C; 316 G; 456 T; 0 other; VANDALNX1 gggtgaattaaatttctatgctcagacgaatgcgaaattaggaaagtatgagtgatgatttcatatttag ttctctctcctcccgacaacaaattctgacatatttgcccctactgagcagagatattgttggatacgta atgattgtgcaacatttaatgcccctgaaaaaattattgctaatgtttcttacatggaaatatatcctta acataacttcaacccaagttgttagtgggtaagacatgtatatgaattagtataaaaagaataatgatac agtttaggatgaactaaatgtggcaataatgtaaccgctacagagcagttggagtcgccgaagcagaaca caagtatgaagataattaggttagtcgataatacgttatttgatatggtatcataggttatattagaaga tacttgatagaagataagaataaataagactatgcccaatagtagaagacgataaccagatagcagataa taaagttaatatagttgtagggcttcaccactcgcaatgaaatgtcgagttattacacgtgtagtgagag taccgcaaaaattcgtatacggtaataaagtatccgataataaatccgttaggggttaaaacttcaacac gcgcaataaaatgtcgagatattacacagagtaaaacaatatgaaatgtcgagataatgagatagcagat aatagagttaatatattcataatagagttaatatattcaccactcgcaacacgtgagacgaattctgaac cgcaaaaactcgtgtacggtaataaattatctgataacaaaccaattaggagttaaaacttcaaaacacg caatgaaatgtcgagataacgagatagcaaataatagagttaatatagatataggtcctctcgcaatgaa atgtcgacttattacacgtagggagagtaaataaaatgtagaattctgaagcgcaatgtcgataataaag tatctgataataaatccgttagaggttaaaacttcaacacgcgcaataaaatgtcgagatattacacaga gtgaaacaatatgaaatatcgagataatgagataacaaataataaagttagtatattcataatagagtta atatattcaccactcgcaacacgtgagacgaattctgaaccgcaaaaactcgtgtacggtaataaattat ctgataacaaaccagttaggagttaaaatttcaaaacgcgcaatgaagtgtcgagataacgagatagcat ataatagagttaatatagatataggtcctctcgcaatgaaatgtcgagataacgagatagcagataatag agttaatatattcataatagagttaatatattcaccactcgcaacacgtgagacgaattctgaaccgcaa aaactcgtgtacggtaacaaattatccgataacaaaccaattaggatgaaagagacgaagaaaaaacatg aggtaaatatagattggaccgaaacgacgcctcgattgaaaactatcaaaataatataaaaatttaattc acccaccaaaatatccaaagcaagatcttctactattcgcctgacacagagagatataagagctacattt agatttctactagacataggggtacatgcgtctttatttttgcaacagtagcgccgaaacttttgggaaa ttagaacctaaatactgaatccactgagcatacccagtgcaatttccc1