;ID HELITRONY1C DNA ; ATH ; 3058 BP ;XX ;DE HELITRONY1C is a non-autonomous DNA transposon. ;XX ;AC AC004793 ;XX ;DT 19-JAN-2001 (Rel. 6.0, Created) ;DT 24-MAY-2001 (Rel. 6.2, Last updated, Version 2) ;XX ;KW Non-autonomous DNA transposon; HELITRON class; ;KW HELITRON1, ATREP11; HELITRONY1C. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 3060) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2001) ;XX ;RN [2] (bases 1 to 3058) ;RA Kapitonov,V.V. and Jurka,J. ;RL Update (May 2001) ;XX ;RN [3] ;RA Kapitonov,V.V. and Jurka,J. ;RT Rolling-circle transposons in eukaryotes. ;RL Proc Natl Acad Sci USA 98(15), 8714-8719 (2001) ;XX ;CC HELITRONY1C is a non-autonomous DNA transposon related to an ;CC autonomous HELITRON1-like transposon. ;CC There are two 94% identical copies of HELITRONY1C in the genome. ;CC There is a 87% identity between HELITRONY1C (position 1-3060) and ;CC ATREP11 (1-1055); their 30-bp 3'- and 19-bp 5'-termini are ;CC 90% and 100% identical with each other. ;CC HELITRONY1C and HELITRON1 share the 88% and 72% identical 230-bp ;CC 5'- and 180-bp 3'-termini, respectively. ;CC There is a 68% identity between HELITRONY1C and HELITRONY1A ;CC (they share the 100% and 91% identical 20-bp 5' and 30-bp 3' ;CC termini, respectively). ;XX ;DR Positions 67744 64687 Accession No AC004793 GenBank (rel. 119.0) ;XX ;SQ Sequence 3058 BP; 1212 A; 433 C; 330 G; 1083 T; 0 other; HELITRONY1C tctacatatacatttttggaacgatttgtgtagaaaaattctttttcaattttgatattgtatgtttagt ccctataaaatcaatcaaacaagatattttatttaggacaatgaccaaacttttgtttaactattatgat attgcactaactacttgcctaaacatagatattgttaattattaccctaataaattgcacaaatcaatcc ctataaactctacgtaattcgcaaatcattaattcctaattactaaatttgatactaaatcctaactaac catatctataattacttagattcggaaatcattatagttttaaatgctaatgaaatcttaccaaaattta ttcttttgttatcaattacaacaataattccggtttgattagtaaatccaaaaatgtataatacaaaacg attaacgctaaacaattgccattaaaactttccactattatcaataatatacattcatttcgaaatatat gagaatatcaacaatttgattttttatcaactactcatatctacatttctatttatttaaaataagcata tacttgattttaaggaatattagtgcctcacaatatcataatcttaccacatcaaattatttcccaaatc tttgccaatattctcggaaaaatctttctaaaatatctcgacataactaattgctatacactacaaaata tttatacataagattttatagaaaattttaattattatgacaaatcgcatttatagcatatacctaaaat attctaattacgtatatttgattccattttagttaagatcgcaaattaattttgcttgctcaccaaaata ttgacctaatcattccaagcctatatatactacatatgtttatctcccatcacattatcaaacacacaca tcatgggcattctttttattttttttttatttttttgtacgtattacccttctttatgaatgtgatgtca atgtattgatgttgatttctgtattaaagaacacaatacttgagaattgtgtatttcttttttctttttg gtaacgacctgtgtattattgttccaaactatttagatattcatatatgaacgtttgtgtgtatatatac gtgtgtttaattttgttgtatttgcggttctgtttttttttattttgtaaagaagtttatgtaagtaaaa aattaaatatacatgtcaaggtgaagcaaaaagatggggagccgtacgtaccccaccggaagctgaagct aaagctctactaatgtcaatgcatcaagtgtggtctgactgctatacatcaatttatcaaaaatagagac tctgaagcgctcatcaacatcatcaaggttcttacggtggacttcattaccgaagccttacgcaaaaata ttcacttttgggcaaccaagtttagaaatatctttttctcttttactaaaatatcgtgtaatcagttagc tcatttgttggcagaaaaaggttagatagattctatgtttttctcggattgtttgagtcctttgatttag atttatgatatgttgtattatgatcggacctaataatctttattcaataaagttttttcgttgaaaaaaa taaaataatagttaaacaaacgtgaatggtttagaactttgactataaaatagaacctaaaattactata tttactttgatctaaaaataataatcatatattaaattttatttttaaaatctaaagtacaaaaactaaa tatttgccatgggggttaaaacctcttgattttgatggatcaggtcaaaaacatattcatataaatattc agccataataaagctaaataatactatactttaaatataagagttacatcgaattaaaaatcatacacaa taaattggttaattttatatacaacaaaatcataagtttataaataacaaaaatttttaagaaacagccc gtcgtatattgcggatcaatctcagctagaataatgcactaattatttagattttaaattttaaatacaa gatattatacagatttttaataatatttagtatatatggaacaaaaaaaaaacaaataattctttatttc acgtacataccatttcctatatacttttaatattttcatactaaaatcctaaaaccaaaaaaaatcaatt tttaaaatctgctacatcgttacttaatgaactgtatgtttcgtatctaaattttaaatattgaaaccta aacaatactaatcatacactaaataatacatagatatatatctatatttaaataagacaaattaatatgt tatatcttcagctaatcttcaaaaaaaaaaccaaattaatatgttatatcttcagctaatcttcaaaaaa aaaaaaaaaaaaaatatggtgttcaatttgacgggacatattatatggtagcacgggttggtcgatatta atacaagatgtataacatgggtgaaatcctaaaataaacaatcaaaatataattatacaggaatataatt aaaaaaaaaaaaaaaaaaattatacaattatacggaaaattgttatacggtaggacgggttttggtctat attaatatagacggtatacagtgggtgaaattctagaactaacaatcaaaatacaatttaagaaaaacaa acaaacaatattaataaaacaattacaacttaaattttgtcataaaaaaattaactcgcagtgtaccgcg ggtcatatccatatctacatatacattttaggtagttataatacttttacttttaacaaaaaaaagtatt atataacaaacacataattacgtaccataaaatacacactctatataaatgatgtgtataataaaaagat ttttctaaactaaacaacatcaaaccaaacaaatactaatataacatcaaaagtaaatagatataaaatg taaaatgatgaattcaaaatataacttgatattaaatatggataatattaaataaaaataataatttaat ttctaacgcaaataatcaacccgcggtgtaccgagggtcaatatctag1