;ID ATREP13 DNA ; ATH ; 648 BP ;XX ;DE ATREP13 is a non-autonomous Helitron DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 29-JAN-2001 (Rel. 6.0, Created) ;DT 24-MAY-2001 (Rel. 6.2, Last updated, Version 2) ;XX ;KW non-autonomous DNA transposon; Helitron class; ATREP; ;KW ATREP13. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 648) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January, 2001) ;XX ;RN [2] (bases 1 to 648) ;RA Kapitonov,V.V. ;RL Update (May 2001) ;XX ;RN [3] ;RA Kapitonov,V.V. and Jurka,J. ;RT Rolling-circle transposons in eukaryotes. ;RL Proc Natl Acad Sci USA 98(15), 8714-8719 (2001) ;XX ;CC There are ~20 copies of ATREP13 in the genome. ;CC ATREP13 copies are 95% identical to the consensus sequence. ;CC ATREP13 shares common structural features with other Helitron ;CC transposons: it has conservative termini 5'-TC and CTAG-3', and ;CC ATREP13 copies have been inserted precisely into the AT target ;CC sites without duplications. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 648 BP; 230 A; 81 C; 84 G; 253 T; 0 other; ATREP13 tcatatatatgaaagttggccaactctctccatatgattgacacatcatcactttagcatttgccatgtg tctattaaataattaatgtaagctcttcaacttctaatttataggttaatgatatatttattatttaatt ttacatattattttattttacatatttaattgtactattactaaatttattttaatattacatgattttt caataaaaccattttaatagttttctcatactcgaagatttttttttgtaatccaaactcaaagtatgag tgtataatagtcgtggattacttaatgatttgagtaagttattctcttaaattgatatttatattctctt aaattgatatttatataataaatcactgagggtgaagaatacgtaaggagctccatcatcaaattcttag gtttctagaatccaacactaccctctgttaaattggtttaagacaaacgttgtttatgaattatgtgtat gatgcattgttgagaatgttgttagaaaaaaatatttttaatactaaaagtaattgcttattgcatgagt gaatgattagataaataaaaattatatttaaattaaacaatacaaaaaaatccaaaaaaaccgcggcgta gcgcgggtgatcacctag1