;ID ATREP12 DNA ; ATH ; 1342 BP ;XX ;DE ATREP12 is a non-autonomous Helitron DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 28-MAR-2000 (Rel. 5.3, Created) ;DT 24-MAY-2001 (Rel. 6.2, Last updated, Version 2) ;XX ;KW non-autonomous DNA transposon; HELITRON class; ATREP; ;KW ATREP12. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 1344) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March, 2000) ;XX ;RN [2] (bases 1 to 1342) ;RA Kapitonov,V.V. ;RL Update (March, 2000) ;XX ;RN [3] ;RA Kapitonov,V.V. and Jurka,J. ;RT Rolling-circle transposons in eukaryotes. ;RL Proc Natl Acad Sci USA 98(15), 8714-8719 (2001) ;XX ;CC There are ~10 copies of ATREP12 in the A. thaliana genome. ;CC ATREP12 copies are 98% identical to the consensus sequence. ;CC ATREP12 copies have been inserted precisely into the AT ;CC target sites, without duplications and deletions of genomic DNA. ;XX ;DR [2] (Consensus) ;XX ;SQ Sequence 1342 BP; 367 A; 247 C; 170 G; 557 T; 1 other; ATREP12 tctaaatatactaaatcagcagtcacttttccaataactgatgcattcagtgattgacacatcagcttag tactatttttttattctttcattttcacgcaggatttttatgtgtcgtttttatttaactttgtttcttt ctcaaacgattttctctttcatccccacgatctccacatctccactttctctcttccaaaaactccatga ctactgtgtaaaatctcaaagatgggtttctcaacatcattaatcgattactcagaaatcaggtactttg ttcatctcaatgaaccaatttcttttttcttcctgacaaagacgaaacgcaccctaagagctctatcttg cattagggaaatcgtattcgtgaataaatcccctttgttaaccatcttctatttctgtttgtaattttgt tttatatatatagaattctccatagatccgaaaatcatatatccttcttctagatttctatggctttttt ttttttttttttgctttgtttctgctttatttgactgaattcgatttctctcatacatctccwtttttcc ataggattattctttaatacaatcaatgcctatgattctcccgtctcacaaacactcaaggaacaacgac aaattttggcttctcatctgaacagttgccttaaaacaagggtgagtttaatatcttaatcgaagctcaa gtgtttttttaatggtaaattaattctcatactttttactattcttctttcatctcttattttacttctt tatatctgcaatttcttttttgtattaaaccgcaattgtattttcacgcaagatttttgtattaatacaa atacttcaattttaaagtcatctcttattttacttctttatatctgcaatatctttgatattgtttcaaa ggcagcgtctgcgtcatgtagttacttacttgtgcacattttacatttttttttagacttccaagctttg ggtgtcaacgaatgtttgtaaactgaattactgatgatgagaagaagaacacattacaattggttggagc taatgatgaaataagcggacatgtatatacccagcataattttcgtacttatactctcttatatttctaa actcttgatttgttagttactgtctatcgcaattgattcattgggtagaaaagttgtaccttctttatat ctttttcttaatctttgtatattcttcagtcaatgataataaatttgttgtatatttatgctgtctgctt tattttaaaaatcttagttaagagttgtagcagatataatttaaaacaatgttgtccctgcatagcaggg gccaaatgctag1