;ID ATREP11A DNA ; ATH ; 1003 BP ;XX ;DE ATREP11A is a non-autonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 01-FEB-2001 (Rel. 6.1, Created) ;DT 01-FEB-2001 (Rel. 6.1, Last updated, Version 1) ;XX ;KW non-autonomous DNA transposon; HELITRON; ATREP superfamily; ;KW ATREP11; ATREP11A. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 1003) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (January 2001) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Rolling-circle transposons in eukaryotes. ;RL Proc Natl Acad Sci USA 98(15) ;XX ;CC ATREP11A copies are ~94% identical to the consensus sequence. ;CC There are ~20 copies of ATREP11A in the genome. ;CC ATREP11A shares common structural features with elements from the ;CC ATREP superfamily; it is a non-autonomous derivate of HELITRON-like ;CC transpons. There is 71% nucleotide identity between ATREP11A ;CC and ATREP11 consensus sequences. ;CC ATREP elements have conservative termini: 5'-TC and ATCTAG-3', ;CC they are inserted into AT target sites without duplications of the sites. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 1003 BP; 429 A; 138 C; 94 G; 332 T; 10 other; ATREP11A tctacatatacatttttgcagccattttgtgaaataaatcctggagttgggacttatttacaatggctgc cactggcatttattatttagttttacaaaatttaaaaagatattaaccaaacgatatcttgcctaatttg tttctaaaaatctctacacaatcttttcatatatcttcaaaaacaaaattccgtgaattttactccacaa aatatgcataaatccgatttatagcaaatatttatattaacattttgcatagcaataaaaatactaattt ataataattaaaatattcacataaaaaatcatatacacatacagaaaaagaactatatytatcatcattt aagccgttgctttatttaaataaaaaaaaacacaaaaacttgaaatcatatactttatatgataaattta aaatctatattagtagtakaaatttaaaatcattcaagraacggtataccacgggtgagatcctaaaatt attgkatttataacaataataatttattttcttggattttataayactaataatttagctaacgagataa tatagacggatttatatgggatgacgggttttgatcgatattaataaagaaaggtatatcacggatgaaa tcttaaaattwacaatyaaaatacaattatacaaccttaaacacaaaaaaccatacaatattaacaaaac aaatataacttgaaatttaaaaaatttagctataaaaaatcgacccacggtatactgcrgataaaatatt caaaattttaaaatccaccatacatcgttacttaaaaaaatatatgttttcatatctatacttcaaaaat tgaaacctaaacaatagtaatcatatactaaataatacagagatwgatatctatatttwaaaatacaaat taatatgatatatcttcagttaatcttttaaaaaataacattatatttttgaaaacaatatagccccgcg gtataccgcgggttaaattctag1