;ID ATREP10D DNA ; ATH ; 777 BP ;XX ;DE ATREP10D is a non-autonomous DNA transposon from the Helitron class - ;DE a consensus. ;XX ;AC . ;XX ;DT 07-MAY-2001 (Rel. 6.1, Created) ;DT 07-MAY-2001 (Rel. 6.1, Last updated, Version 1) ;XX ;KW non-autonomous DNA transposon; the HELITRON class; ATREP10D. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 777) ;RA Kapitonov,V.V. ;RT . ;RL Direct submission (May 2001) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Rolling-circle transposons in eukaryotes. ;RL Proc Natl Acad Sci USA 98(15), 8714-8719 (2001) ;XX ;CC ATREP10D copies are ~97% identical to the consensus sequence. ;CC There are ~20 copies of ATREP10D in the genome. ;CC ATREP10D shares common structural features with elements from the ;CC ATREP superfamily; it is a non-autonomous derivate of HELITRON-like ;CC transposons. There is an 82% nucleotide identity between ATREP10D ;CC and ATREP10A consensus sequences. ;CC ATREP10D elements have been inserted into AT target sites without ;CC duplications of the sites. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 777 BP; 318 A; 75 C; 81 G; 303 T; 0 other; ATREP10D tcttattatataaagtatggtttttaaaattactaactcataggattatgccatgtgtcaagtctatcga tcagatgttgacacgtgtaagaaaataattaacttttttcttcttaaagaaatagaaatactaaaaaaga aatcaattaacttttttcttcttaaagaaatagaaaactaaaaaataaatcattattaacatatactaat tcatatgtctatatctaaaaaatattacattttatttttcttaaccaaaaggaaaattaaccaaaaatat ttatatatgttattggtcaaatttttaatatgtatggtattaacaaattttttattattattaattatgt tttgttaattgttaataatttttaatattaactaagatatagatttgatctcatatatatattattttga catgaaatcattatcaagtaagatgaagtgtgtagaattaaaatcgagttttttatgaaatagatagtta aattgtattacaaaattgaatatgtaagataaaaatttgttcttttcttctaaatactaaattataataa agaaaaagtgtgtaggttactatttagacttcaaatatcatcaataagattgaatgggtataataaaata aaatgcataagactactattttactattcaaaattatatatcaagaacaatgtatagattattattttac tattcaaaatttaaatattatcgataaaaaattacagttacatcttacacccgcctatttaggcgggcct tatctag1