;ID ATREP10A DNA ; ATH ; 1380 BP ;XX ;DE ATREP10A repeat - a consensus. ;XX ;AC . ;XX ;DT 07-SEP-2000 (Rel. 5.8, Created) ;DT 07-SEP-2000 (Rel. 5.8, Last updated, Version 1) ;XX ;KW non-autonomous DNA transposon; HELITRON; ATREP superfamily; ATREP10A. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 1380) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (September, 2000) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Rolling-circle transposons in eukaryotes. ;RL Proc Natl Acad Sci USA 98(15), 8714-8719 (2001) ;XX ;CC ATREP10A copies are ~97% identical to the consensus sequence. ;CC There are ~10 copies of ATREP10A in the genome. ;CC ATREP10A shares common structural features with elements from ATREP ;CC superfamily; it is a non-autonomous derivate of HELITRON-like ;CC transpons. ;CC ATREP elements have conservative termini: 5'-TC and ATCTAG-3', ;CC they have been inserted into AT target sites without duplications ;CC of the sites. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 1380 BP; 478 A; 148 C; 207 G; 547 T; 0 other; ATREP10A tcttattatataaagtatggttttcaaagttactaactcataagatcgtgccacgtgtcaagtcaaacga tcagatgtttacatgtgtcattcaaaatttaacttttttattctcttaaaaaaatagaaaatcttaaaaa gtaaacaaatttacatatactaatttatatatctatatatttataaacaattaacatttattcaacaaaa ggaaaattaacaaatttgtctttaactaatgtaatcataagtgaaaatagaacattttgagaaaaatagc ttagcttataggatttaacttttcaattatttttaatgagaatattttcatttattaattttaactcatt taatattaatttgcatgatgtaaaattaacttacgagattacggcatatataaaaaatatattttcaaca atgtttggtttctaaatatttttgtggatttctgtttttttattaattattagccctaggcgtttgggta ttcgggtcgggtatttcgggttcgggttttcgggcttagaagtttaggacccgttcgggtaatttaagat ttcgggtcgggttcggttcgggttcgagtttatttatatattgaaatatcaaattttgtctgcaaatcta ttaaattacttgaaaattttaaaaattcccaaaacaacacgagtagttttgcttgaatatatctaaaaat acacaaaaataactaaaatatccaaaaaatcctaatattttctatatataagtataaatataactaatat atacttatatttgagatatgtttggatacctattcgggtttgggttcgggtttttcgggttttgaagttt agacctgttcgggtatttgaaaattttgggttcgggttcggatcgggttttttggatcggttcttcgggt ttgggtattatgcctaggcctattaattatgttttgttaattgttaattatttttaatactaactaggat atagatttgatatgtcataaatattattttgatatgaaaatgttatcactcaatatgaagtgtgtagaat ttaaatcgagtttattatgatgacatagatagttaaactgtattacaaaattgaatggtgtaagatagaa atttgttttttctttttcttttctagatactaaattaaatatagaataatggtcggttactttttagaat tcaaatatcattgataagattgagtgtatataattaaaatagaatgcataagactgaaattttgtttaaa ccaataattattaaattaaatatcaaaaaaatatatagattgctatacaatattcaaatactatcgataa aaatttatttttgtatcttacacccgcctaaataggcgggccttatctag1