;ID ATN9_1 DNA ; ATH ; 678 BP ;XX ;DE ATN9_1, a putative nonautonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 26-APR-1999 (Rel. 3.3, Created) ;DT 13-OCT-2000 (Rel. 5.9, Last updated, Version 2) ;XX ;KW nonautonomous DNA transposon; MuDR; VANDAL; ARNOLD; ATN9_1. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 678) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (April, 1999) ;XX ;CC ATN9_1 is a putative nonautonomous DNA transposon that may be ;CC mobile currently. ;CC Its individual copies are 98% identical to the consensus ;CC sequence. They are flanked by 9 bp-long target-site duplicates. ;CC This element does not have terminal inverted repeats. However, ;CC we consider ATN9_1 as a nonautonomous DNA transposon mobilized ;CC by MUDR-like transposase because MUDR-related transposons induce ;CC 9 or 10 bp-long target-site duplications and are flanked by ;CC 5'-GGG and 3'-CCC (ATMU - like elements) or do not have TIRs ;CC like ARNOLD/VNDAL-like transposons. ;CC There are about 50 copies of ATN9_1 in the haploid A.thaliana ;CC genome. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 678 BP; 292 A; 84 C; 87 G; 215 T; 0 other; ATN9_1 gggtaatattagtagataaccaaataaaacatacaaattaagaaactagcagagagaaagttttttgtta caaaataaccatggacccacgttgtcggaagaaaggaaataacaaagctacccttcatttgttgtaagat gaacagtaaacgaaacacatccgtgtaatttttcaaaatagcatgtaacattaaaatttcacatgttata tttagtttaaaaacatgctatttcaaaaaacgttatgaatttttaagaaaaaacattattatgaaattct tttacatgaacagaatcttaaaaaaaaaaaattatatgtgattttaataaaaaccatgtattactaaaaa ataagaatatatttttaaagaaatcacgtgtgatcttaataaaaaacgtgtattactacaaaatatcatg ataaaaagagatattaaactgaatagaatgttttttccaaaaaataccatgtgctttttataaatactat gtaataagagaaaataacaagataaaaagaggatattatgttatcgcatgtatttcggaaaaataacatg ttacaaaggacatttacgtaattacacgtgttctccaacatgtttccgacaagatactgtgactcaaggt tagtttgtacattcttttcaaatctatagtcatttattataaatactc1