;ID ATMU6N1 DNA ; ATH ; 1012 BP ;XX ;DE ATMU6N1 is a non-autonomous DNA transposon - a consensus sequence. ;XX ;AC . ;XX ;DT 28-MAR-2001 (Rel. 6.1, Created) ;DT 28-MAR-2001 (Rel. 6.1, Last updated, Version 1) ;XX ;KW non-autonomous DNA transposon; MUDR superfamily; TIR; ;KW ATMU6; ATMU6N1. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 1012) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (March 2001) ;XX ;CC ATMU6N1 is a non-autonomous DNA transposon from MUDR superfamily. ;CC Its copies are flanked by 10-bp target site duplications. ;CC There are 3 copies of ATMU6N1 in the genome, they are 97% ;CC identical to the consensus sequence. The ATMU6N1 consensus ;CC sequence forms an imperfect palindrome and it has 91% identical ;CC 284-bp terminal inverted repeats. There is a 79% identity between ;CC ~220-bp termini of ATMU6N1 and ATMU6. ;CC ATMU6N1 (positions 278-657) harbors a portion of a host gene, which ;CC encodes the homeobox-leucine zipper protein Athb-1. ;CC Its exons1-2 and intron1 have been intercepted by the transposon. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 1012 BP; 320 A; 171 C; 177 G; 344 T; 0 other; ATMU6N1 gggaaaaatgtcgttttatacgcaaactttcaaaaagtgaccatttaatacgtgaactttttgtgtggcc aaataaaacataataaaaatgttgaccggtcgtttcacacaaatgttattgttgaccaggccaaaatccc cataccgttatctttttctaacggatacgttaattccgttaccacacgttaattagtttcctgtaatact caaaacgacgtcatttcattgaaatcaaaaaatcaaaattcccaaattgatttcaaaatccctaaattcc aaaatggaatccaattcatttttcttcaatccatctgcttcacatggcaacatcatgttcttctttagga atctcaatcccgttgtccaaggttcttttctcactctcataatcttatttcatcatgttggaagtttccc tgtttttgttttgttgtcttgtgaataaaatgttacgaacacacacacatgagaaccaatttgaatatga ataataacattcgactattgacagcagttgttcgtttgaattcacgaagggggaggaacaagatcgatga tgaacaaggaggaaacatcaaagcgaaggcccttctttagctctcttgaggatctttacgacgatgacta ttacgacgaccaattgctgaaaataagaggctgttagggatttggtttttagaatttagggatttgattt ttggaatttaggaattaaggatttgtttttttggaatttagagattttgaaatcaattttaggaattttg attttttgatttcaataaaacgacgtcgttttgagtattgacggaaactaattaacatgtgttaacggaa ttaacggatccgttaatgaaagataacggcatggggactttggcgtggtcaacaataacatttgtgtgaa acggccggtcaacgtttttattatgttttatttggccacacaaaaaattcacgtattaaatggccatttt ttaaagttcacgtataaaacgacatttttccc1