;ID ATMU6 DNA ; ATH ; 4172 BP ;XX ;DE ATMU6 is a molecular fossil of an autonomous DNA transposon. ;XX ;AC AC006429 ;XX ;DT 01-FEB-2001 (Rel. 6.1, Created) ;DT 01-FEB-2001 (Rel. 6.1, Last updated, Version 1) ;XX ;KW autonomous DNA transposon; MUDR superfamily; TIR; ;KW transposase; DNA-binding protein; ATMU6. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 4172) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (January 2001) ;XX ;CC ATMU6 is a fossilized copy of autonomous DNA transposon from ;CC MUDR superfamily. ;CC It is flanked by a 10-bp target site duplication. ;CC ATMU6 has 210-bp terminal inverted repeats and encodes ;CC two proteins, ATMU6p1 and ATMU6p2, similar to these ;CC encoded by ATMU5, ATMU4 and ATMU3. ;CC Regions coding for ATMU6p1 and ATMU6p2 are saturated by multiple ;CC false stop codons and deletions, the ATMU6 TIRs are 77% identical. ;CC ATMU6 is older than its closest relatives ATMU5, ATMU4 and ATMU3. ;CC ATMU6 is 76% identical with ATMU5 (72% identity with ATMU3 and ATMU4). ;XX ;DR Positions 13270 9099 Accession No AC006429 GenBank (rel. 119.0) ;XX ;SQ Sequence 4172 BP; 1389 A; 726 C; 822 G; 1235 T; 0 other; ATMU6 gggaaaaatgtcgttttatacgtgaactttcaaaagtggccattttatacgtgaacttttaggtcggcca aataaaacatgataaagacgttgacccgccatttaacacaaaacataaagttgacctgaccaaaatcccc gagacgttaacttgcattaacagatccgataacccctgtaagcagacgttaattttttctgttaatgcct aaaacaatgtcgtttcataaactgaaacagaaattcccattttgatttcaaaatccctaatttccaaaaa ccaaatccctaattcttactttggcgaaatcgcgattttgatttgatttcatcttgaatttgtatccttg gagtcctagattgtatcaatggaaggcaaattagacaatgatgaagctccaccacgaggcgaagatgaca ccaaagatgttgttcgagctccaccagcggaagcagttttagagtttgataacggagttctagctctgcc ggctgtaggcgtagtagagtcttctatcgtagttaaagctcgagtttcaaagcggctttgaaaacaaaaa cgaagaagagtcagacattaaaaagaggaggatgaagaacctacatttgagcctgaccctgaaaaatgaa gaagactgcgccgtgtatggtgatgaagactgcaatgtcgttgatgatgtggttggtggtggagataacg attataatggtggtttacgcggtgaagaggatataaacacgacttcaagcgtgttcttttgatgtactct ttaaagacatggtataccatttctctttatgggtctgaatctatggttgttgctgcgaagtggtcataaa ttggtgttgatggtgttaaatgtggttggaaagtatattgttcgtatgagaagacaaaacataagatgca agtaagattttatatgcatacttgtgttaggtcaggatattcaaagatgttgaagcggtcttccattgca cttttgtttgatgaaaggctgagagtgaatccaaatatttcaaagaacgagatggttgttgagattcaga gagaattcaatttggatgtgactccagaccaatgtgcaaaggccaagaccaaagtgttgaaagcatgaca tgctactcataatgatcacttttcaagaatatgagattatcaagcggaggttttaaagtagaacccagag acagagtttgagatagagacaacagtagggctttttattggaagcaagcaaaggtttctctgatgctata gctgctttatatcacaaaaggattcttttctctggtgctatatctgctttaaatctcaaaaggattcttg gaagcgaacttgtagacctgtgataggaatagatgggttttctaaaatgggatgtaaaaggtcacctttt agctgtagttggaagagatggagataagaggattgttcctatagcttgggcagttgttgagatagaaaac aatgataattgggactggtttttgagacagctctctactagtttgggactgtgaaatgcaacatctagtt atcatttcagataaataatcagttaattttatcatcttttgcttcagtttaatgtcttttatgaagggtt tacgcttatgtttttgtgttattttacagggtctagtcaaagctatcaataccatacttccagaagttga gcatcgacaatattcaaggcatataatggacaattggaagagagacaaccatgagatagaactacaatgt ctctttgaaaaacaatttgaagctacactgaagaagtgttcatgaataatatggaagagctaaagagata caatcctcatgcgcatgccactcgcaacttactagtccaatgacatggtcgagagccttctttagaattg gacacgttgcaatgacagcctcaataatcagtgtgagtcttttaataagactattaaacaggctaggaga aagcctttgttggattagctagagtacatccagaggtaatgcatggtcataactacgaagacgtatatca ttgctgacaaattgaagacaaggttcacaaagagagcccatcttgagattgagaaaatgatagttggggt tagaaattgcgagagatatatgtccagaaacaatttgtatcaaattgatgtgaatggtgttagctactat gttgatacggagaagagaacttgtggtcgcaggaagtggtagatggtggggatcccatgtatttatgcga cacctgtgataataggaagaagagaaacagttgcagactatgtgagcaagttttacacaaaggtaatctg gcgaaaaacttataaagatggtattagccttgtccaaggtatgccattgtggcctaaaaccaataggctc cctgttttgccaccaccatggacaaaaggaaatgttggaagaccgagtaattatgttaggagaaaaggaa gaaatgagacttcttcttcttcaaataagaacaagatgccactgcaaaagagaatcatgacatgctctaa ctgccttcaacaagggcaaacaagcaaagctgcaaaaatgccactattctgattccaccaaagagaccaa gaggtcatccacgaataaatcaggtttgtattcttgtttttttttatatgttttacaactcacttaatca tgcaactgttcagactgtcatatttaacttaggaggaatcacaagtgctaagatcacaacctcatcaaag ttcacaatctcattaaggatcacgatctcaagtgctcgaatcgcaagagcaaatacacggatcacaacct catcaaggatcacaatctcatattcgatcacaaggaccaagggcaacaggcggaacatcagaaagaccaa gggagacaggtggagcatcacaagtacaatcccaaacagaaccacaagcacaagcacaaactgagccaca tgctcaaccacaaggacttggtggatttgcatcatggtttgagtgttcaagacaagattagtcacaagtt tctttttgttgttgtttgaacttaagctttctcataagtttatttttggtggttgacataatggatttgt ctttatgacataagcttagtatcgatttcattttgtggtttcgacttgtctttgtgacacaagttttata atgtatgaatgagtttcattttggtgattctcattgttaaacaagcatctagtagcatttcattacaatc acaacactaagacaaaacactaggactgattatcattgccaaacaaacatttcagtaccataaaaacatt ttattacaaacacaaaacactagtaaccaagaacaagcttatggtttttggtcttatagaacattatgat cataattgcaatgactgttatacaaaggcacaccaagcacaatttggtcatcgatttccatatcttcaat tccattttgctccacatttcatcttccttcaattcttggatcaaaacctttaattctgcaatctcgacta caacctgaaatttgacattgtttatctagctatcaatcatagagattatcagtattgcatctacaacctc ttcatacacacaatcttcgactcacttaaacaaatggtcctgcatttacaacgacaactttttaccgatc aaacaccaaaaaaaacaaattcaaatctacttacatcttgatatgttggacaacagaagaaggatcttct tgggttcttcgtcgagcttgatatatagatgatgaaatctctcccccaatgacactttgaaggaaaccca aggttcccacttcctccttcttgaacactcaaattttttaaactcatatctacacaaaatggagattttg agctcaaaaaaaatatatcgagaatagttcaaattttggggattatgaagaattagggaatgaaaaatcg atttgggaattttaaggtttgtactcatcacaaaaaatcgtttggtattaacggaagacgactaacgtct gctaacgagggttatcagatccgttaatacaagttaacatttcggaaattttggccaggcaaactttatg ttttgtttaaatagcggatcaacatttttatcatattttatttgatcgatctaaaagtttacatataaaa tgaccattcttaaaaacatcacgtataaaacgatattttccc1