;ID ATMU1 DNA ; ATH ; 4929 BP ;XX ;DE ATMU1, an autonomous DNA transposon. ;XX ;AC AF077407 ;XX ;DT 16-FEB-1999 (Rel. 3.1, Created) ;DT 16-FEB-1999 (Rel. 3.1, Last updated, Version 1) ;XX ;KW autonomous DNA transposon; MUDR superfamily; TIR; ;KW transposase; ATMU2; ATMU1. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 4929) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (February 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATMU1 is an autonomous DNA transposon from MUDR superfamily. ;CC It has 10 bp-long target site duplications and ;CC 280 bp-long TIRs. These TIRs form several subfamilies of ;CC ATMU nonautonomous transposons. Transposase encoded by ATMU1 ;CC is most close to the transposase encoded by ATMU2 transposon ;CC in the A.thalian genome and MUDR transposons found in the maize ;CC genome. ATMU1 transposase has been identified before (see GenBank ;CC Accession No. AF077407). ;XX ;DR Positions 93315 98243 Accession No AF077407 GenBank (rel. 107.0) ;XX ;SQ Sequence 4929 BP; 1466 A; 879 C; 1159 G; 1425 T; 0 other; ATMU1 gggaaaaaaccctaaaaacaccccatatatttttaatttgcccgtttaatacctcggttatttaatttgc ccgaacaatacctaggtttatttcttttcgctttaaaatctttcgtttagtttttgtttggaaaaaccag cttctcgggttaacgactgttaacttcgttaacggagtgtctaaccgaggttaatacttaaccccacgtg tttatttcgatctaatcaaagacactgttacccttttggcattctcccccaaatcgatttcgattccaaa ccctaaaattctctctttgatttcgaaaccctaaaattctctctttgatttcgaaaccccaaatcgattt cgatgtgtgtcgtcgtttaactggttgcgttgtggtcggtaattgatttcaacgagtctgctaagtcacg atgaggtatgtaatcgaatcgattcttagggttagaattgggggaaatcgatttctttgttcgtcgggat cgatttctgggttgtcgggattgagaatgggaagatttctggatcgattactggatttgtcgggttagat ttctgagtttagagtaacagtttctatgtttgtcgggttcgatttctaggttaagggttttgtcgggttt gatttctgggtttttagagttctaggtttgtgtcatttgaacttaatccccttattctttgttgtttttg cagtggtttcgattgtttgaagctgcatataaagtatggaggagatgtctcaattcgcgatgagtcgttt gcctacattggaggatttgagaagagggatatgctcattgatccagatctgatgacgtggtctatcttcg ccgatttcccagcagagaatggagtatctgctcccgtgaaaaaagtttggtacaagcttgcacacgaaag ctttgaatcagtaagagctataggcgaggatagagatagtgggattaggcagctgtgcagtgaagcgttg attggtggagaagtagacgtttatattgagcaaggtgtgtctgaaccaacaccgtttcctatgtctcagc atggtgaagaggctgttgttgaagagatggaagagtctgatgcagaggttgaaggagataaaactgggga agaagacagaggtaaagatgatgatgttgatcctgtagcagaatgtgagggagatgatcctcggtttagg gccttttatgaagagataaatgaagaggataataaccaccaagatgcaggggaagcagctggtcagggaa ttcctgaagctgatgaaggacatgtaacgggtcaagaggctggagttgatgaaggacatgtaacgggtca agaggctggtcaagaggctggtcaagaggctggtcaagagggtattgatgaagaagagtttgaggatcaa tgcatggatacagagcgacctgatgctgcgttggatacagatgaggagtgggatgctttagaccgtgaag aaagagaaattgcaagagctaaattcaccaaagataagccaccttatctatggcttaagcagcagtttaa taatggtgaagagtttaaggatcagcttttgaggtatgtcttgaagactaactatgatgtgaagttatgc aaatggggtcagaaacagctgatggctatatgcagccatgaaaactgtcaatggaagatttattgttttg tggataagagggtagggaaatggacagtgaaaacttatgtggatgcacataagcatgcgatcagtggaaa agcgaggatgctgaaacaaggtgtgattgccagattattcagagatgaagcaagaaggaggccaaccttg acttaggttgacattaaggatgagataatgatgaggtatacgatttcagtgtctaagtggatatgcagga aagcaagaaggatggcgtttgacatggttattgaaacacagagacagcaatttgcgaagttgtgggatta tgaaggtgagcttcagaggtctaacaagcacacacacacagagattgtgacaattcctagagctgatggt aagcaacaatttgacaagttctatatctgttttgagaagcttagaactacatggaagagttgttgtcggc cgattataggattagatggtgcttttctgaaatgggaattgaagggtgagattcttgcagcagttggtag ggatgcagacaataggatttatcctattgcttgggcaatagtaagagtagaagataatgaagcttgggct tggtttgttgaaaaactgaaggaggatttggatttgggcgttagagctggtttcactgtgatatctgata agcaaaaagggttaatcaatgcagtggctgatttactacctcaagcagagcataggcattgtgctagaca cgtttatgctaattggaagaaggtgtatggagattactgccatgaaagctacttttgggctattgcttac agtgcaacagaaggggactactcatacaacatggatgcgctgagatcatatgatccagatgcatgtgatg atttgctgaagacggatccaaccacgtggtgcagagccttcttcagtacacactctagctgtgaggatgt aagcaataatctctctgagagtttcaacagaacgattagggaagcaaggaagctcccagtggtaaatatg cttgaggaagtcaggagaatctctatgaagcgtatttctaagttgtgtgacaagacagccaagtgtgaaa caaggtttccacccaaaataatgcagattcttgaaggcaaccgcaagtcatctaagtattgtcaagttct caaaagtggagagaacaaatttgagatattagagggtagtggctactactcagtcgatctcttgactaga acatgtggttgtaggcagtgggagctgacaggcattccttgtcctcatgcaatatatgttatcacagagc acaaccgcgacccggaagagtaagactttaatctctttctcttctcttttaccaatctatgttattatgt gattgtgttttctgaattggagtttgcttgccatttagctatgtggataggctcttagaaacacaggtct ggaaagctacatacaaggacaacatagaacctatgaatggagaaagattatggaagagaagaggcaaggg acgaattgaagtccctgataagagagggaagcgagggagacctaagaagtttgcaaggattaaggagcct ggagaatcatcaactaatccaacaaagcttacaagagaaggtaaaactgtgacatgtagcaattgtaagc aaattggtcacaataagggatcctgcaaaaatccaactgtgcaattagctcctccacgcaaaaggggtag accaagaaagtgtgttgtaagtattcttaaccattacctatcttactatcatttgcaatattatagcatt aataattctgggttttgtataggataatgatgatccatggagcatccacaatgcaccaagaagatggagg gcagctcaaagccagtccacaccacctgttgctcaaagccaatccactccacctgttgctcagagtcaac ccacacagaatccgcagcattcaagtgctccagctgctaatccaagtggtagaggccgagctcgtggaca tcctcctggagttaaaaatggtcaaggcaagggtaaaggcaagggacgtggtaaagtcactgatgaatct ccgagacctcctgtgttttttatgtccccttggactgataaggtcttcgatgtttggagacctgagagga aataggatagatttaagttctcttttgtgttcttattgactttgtaggatgttatttatgtaggatgatg tgtatgattggtaggatcccgattttttttgggtgggatctagaccttactctgatttttcggctctttt gactcaatgaaagtaggatattaccattgatttaagagttttacaacaacaacacagcaaacaacaaaga acttctaaaacaactagcattagaacatccataaaacaatgcaaagaacttcctagcatccataactccc tattacaaagcctacttctttcccattcccagacacattgcaatgacaacagtgaaacatccccaagaca acacaatcaactgcctaagcactttttccctctcattcgcacccataacttcaaattcaagctgcttctt ctcctcctcaagctgcttcttctcctcctcaagctgcttcttctccttctcaagcttcttcttctcctct tcaagcttattcttctcttccttgtgcttcttcatatcctcgttagtagcagaccctgacccactcggta actattctttcattgacctcaaagactctttcagttgacgaatctcatctcgagcctccaataaactctc tttttgccaaccaaatggcttctcctcatctgcccaattgatgaagccatgagtcccacatctgaaaaat tttctacccggattttcatttgtccatgactttgtaactgtcgttgccctaccacaattgcaaagaggac tcagctacggctaattgaattcgcatcagaccctgaactttggctcatcatttttggaaataagaagagt tcttgtaaagaagagctaatagaactagggtttataataacaaatcgatttgggggttttcgttaagggt aacagtgtctttatattgggcgaataaaacacgtggggttaagtattaacctcagttagacacaccgtta acgaagttaacagtcgttaacccgagaagctgatttttccaaacaaaaactaaacgaaagattttaaagc gaaaagaaataaacctaggtattgttcggacaaattaaataaccgaagtattaaacgggcaaattaaaaa tatatgaggtttttttagagttttttccc1