;ID ATHPOGON3 DNA ; ATH ; 712 BP ;XX ;DE ATHPOGON3, a nonautonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 27-JAN-2000 (Rel. 4.1, Created) ;DT 27-JAN-2000 (Rel. 4.1, Last updated, Version 1) ;XX ;KW nonautonomous DNA transposon; TIR; pogo superfamily; ATHPOGON3. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 712) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2000) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATHPOGON3 is a pogo-like nonautonomous DNA transposon. ;CC Its individual copies are ~91% identical to the consensus ;CC sequence. They are flanked by TA target-site duplicates. ;CC This transposon has 24 bp-long terminal inverted repeats; ;CC the remaining central portion is AT-reach. There are about ;CC 50 copies of ATHPOGON3 in the haploid A.thaliana genome. ;CC Transposase involved in mobility of ATHPOGON3 elements ;CC is encoded by the ATHPOGO-like autonomous transposon. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 712 BP; 255 A; 71 C; 78 G; 299 T; 9 other; ATHPOGON3 tacagtagaaactctataaattaataatgttgggaccatgaaattttattaatttatagtgatattaatt tatcctataaattaatatttattaatttatcgtataaattaataaatattaatttatagaaatatttacg taaaatacaatactatattcttttaaaaatgtttwttaatttaattttctatatgttttgttgtttgyat atntaattatgttagatttttatttttctttgacttttttaatttatttttckgcaagatattgtgtctg tatatctacgacrttaacgtgaacgtaaacgtaaacatgaagcttaatccaatttctctttacacaaatc ttagcaatgctttctcaaataaaagattttacaaaatcaactatgacggatcaaatacgcaaatagttat gtgagtacaamagagatcataccarytgtattttaaaaagagttgtaattgtagcttgaacaaaaatttc atataaaaattagtcttaaaatatatacttaagatttatgattattaatttataatattattgggactat awttttacatagggatttcaaaaaaattattatcttattatcttatcgattttggttaatttttacattg gcccgacttgggaccgacaaaatttattaatttatcgtgtttattaatttatcgagtattaatttataga gtttctactgta1