;ID ATHILA4_LTR DNA ; ATH ; 1207 BP ;XX ;DE ATHILA4_LTR is a long terminal repeat from the ATHILA4 endogenous ;DE retrovirus - a consensus sequence. ;XX ;AC . ;XX ;DT 27-JAN-2000 (Rel. 4.1, Created) ;DT 27-JAN-2000 (Rel. 4.1, Last updated, Version 1) ;XX ;KW Gypsy-like endogenous retrovirus; ATHILA superfamily; long terminal ;KW repeat; ATHILA4_I; ATHILA4_LTR. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryotae; mitochondrial eukaryotes; Viridiplantae; ;OC Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; ;OC Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;RN [2] (bases 1 to 1207) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2000) ;XX ;CC ATHILA4_LTR is a long terminal repeat from the ATHILA4 endogenous ;CC retrovirus. There are about 100 copies of ATHILA4_LTR in the genome; ;CC they are ~90% identical to the consensus sequence. ;CC Solo LTRs are flanked by 5-bp target-site duplications. ;XX ;DR [2] (Consensus) ;XX ;SQ Sequence 1207 BP; 315 A; 203 C; 219 G; 459 T; 11 other; ATHILA4_LTR tgatatawccctatttttactgattttagctatgttttaggtataggttttagagtctttttgttatttc tagagtcttttctagtctttttcaggtctttacatgtttgggatgcatttggagataatggagcattctg gagcaaaacagagaacttaagctgcagaagcaatycggagacgaaaatgcacgtaggtgtcgaacgacac cacccctggtgtcgagcgacaccaatacctgacggcaattccaagacgcaacttattgatgttttgaaga tttccaaattcggcccagaactttctcctatttttaaakaaggcccatcacgttttttaggacatatata tagttttaaggtcattgtttagacctaagcttkgagaggctaatctctttatctcttttgtacttgggag caaaaccctgtggagactccctttagagaagatctttcttaacctttttctcttcttattttatttattg atttcttattcaatcatgttgtttgtttcattcatcatgtytgagtagttttcttgttaggtttagggtt tctcattagggatttagatgatttagtagattgcccccttgctaggttatctgtagaattcttcatcttt gattgttcttaatgctagttctagagtaaytaactagaacttgattttagataataggtatgcccaccat aggtatctgttattggatctattatttgatgagcctaggcatttaagaaagaacaggtaggyttataaaa agaatctggcctatctactaaggtgaactaatcaaacttgatwanaatgcatgtttaggtttaggatttc tcggcttctccggttattcttagctataggcatagggagtttcgcggaacaccaccggttattctataat takagtttgagtttaagaacggttcgataacaacctagctattactagatctactatcatctatttcctg agaataccctaagcctgacgcttttattatcttgttttcacaaccaacaatctgctattgcttacttttt gtttctttttattttatttactattttacttagcttaattcgattaaccattagtctattgtgtganccg aagaactttgtggaattcgatccttaagtgctgcaattgatctctttatttgagagagtagtcttagggt taatttgacctatatca1