;ID ATHILA4_I DNA ; ATH ; 3022 BP ;XX ;DE ATHILA4_I is an internal portion of the ATHILA4 endogenous ;DE retrovirus - a partial consensus sequence. ;XX ;AC . ;XX ;DT 27-JAN-2000 (Rel. 4.1, Created) ;DT 27-JAN-2000 (Rel. 4.1, Last updated, Version 1) ;XX ;KW Gypsy-like endogenous retrovirus; ATHILA superfamily; internal ;KW portion; gag; pol; ATHILA4_LTR; ATHILA4_I. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryotae; mitochondrial eukaryotes; Viridiplantae; ;OC Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; ;OC Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;RN [2] (bases 1 to 3022) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2000) ;XX ;CC ATHILA4_I is an internal portion of the ATHILA4 endogenous ;CC retrovirus. There are about 50 copies of ATHILA4_I in the genome; ;CC they are ~90% identical to the consensus sequence. ;XX ;DR [2] (Consensus) ;XX ;SQ Sequence 3022 BP; 796 A; 736 C; 730 G; 760 T; 0 other; ATHILA4_I aatttggcgccgttgccaaagttcttgggaatcatcattgagtttagtttagagatttcgtctagttttt acttttattttgttactcacgcgtttcttgttttcttcttttctgtgtttcaggtgtatgcctaggcaaa caaggagcacaaaacagaaggagcttatcaacttgtctgttctggacttgggaaaacttgaacgcaccaa ccgaaaaactcagagattagcaatggctgacagagtcatcagagctgatgcagaaggagttttgagagat gaggatgggcaagcctacaatgaggctggtcagagattggatgatcatggactcatcctacctgaggacg ccaatgaggatcaggcgcgcctcaatgcgcaattagctgccagagacgcagcagggctcggtgtcgagcg acaccaactgggtgtcgatcgacaccttcgggagcagaatgcagatgcgattggtgtcgaacgacacaac agaggtgtcgatcgacaccaaccccagattcctgcagctattcctccagctgcggaaccacgtcgtactc ttggggatttcaacaggccagacctgttctatgctaatcgatcagcgattgtacccccacccttccagag gaacgactatgagctgaagcctggctactttgctttagttggccagcatcctttccatggcttatctcat gagcagccaatggaccatatcgagcgttttgaggaccttgttctgagcatcaaggctaatggagtctcag aggactacctactgtgcaagctcttcccttattcacttgctggggaagccgcttcttggctgaaacaact taaagcaggttccctcaagacttggagaagcatcaagatagccttcttgaacaatttctacgatgatgct aagtctgaggagttgagaaacaagctgtctaccttcacacaaggtccagctgaagctttcaaggctgctt gggttcgtttcaaggagtaccaacgggactgcccacatcatggtttcagtgaggtacaacttctaggtac cttcttcagaggagttgattggagataccagatggctctagatgcagcgagcaatggtaacttcaacaca cgttacccagctgatgctacagccctgatagagaacctcgcttgcagcaacagtaccaagaatgctgact ttgagaggaagaagattgctggagctatttcaggaaatcagatggcagaggtgaatgctaagctggattc ggttcataacttgcttacagggaagaagcatgtccactttgcagctgaggaagagactattgagcctgag cctgagtcagaggaaggagtcttctacatagatggtcagggatacaggaagtttgggcagccacagggca acttcagtggcaacaggtttacagggaaccagggttcctccaactacactccaaagcctgctttccagaa gacctttcctcagagcaactttcagaggacctatggtaattcagcttaccaagcccccccccctccaccc tcatcagagacaagaatggaatcgatgcttgagcagattctggagagccaaacaaagcttgttgtggagt ttaatggcaagtttgatgctgtctacacagatcttaatgggaagatcgacaatctgagctctcacttgaa gaagctagatgtacaggtagctcaaactgcacaatctatcaagagacaagagggttttcttcctggtaat cctgatgctaacccaaggaagagctgtaatgccatcttgatcagagaaggagatgatgtgtgggaagaat tggacactgaagacgagttggagctcgcagttgcagagatggtgtcgaccgacaccctccagtgtcgatc gacaccatatgggacgctcttctcagagacgactcaatacgacggtgtcgatcgatacccctctagtgtc gatcgacactggatccggactgcaccttgtgaggtgcaaatccctatgcagcccgagtctgtttacactc ctcctgtcccttatccgaggaagcgtcgttctaagcaggagattcatgctgctaagtgcacaaccataat ggagaagatcctcacttctcttcctaaggatgcttctgagacatcttctgctccactcaacaggtatgtc aagcgacttgttgacaatggtattagctcagatgaagctaagctgctgaccagggacatcagtgcaatca tgctgcctaaggtcaagaaagagaaggcacagagagtggacattgctgagtacatccgcaccatcactcc tgatcagaccactgagaagcttccagatccaggtagctttgttcttgattgctctatctccacaagcagg ttcagccgctctttgtgtgatctgggatcaagtatcaacctcatgcctaagtctgttgctgagagactag gcatgactaactacaggccgactcgcatcactctcctcttcgcggatcgttccaaacgaatccctgaagg aatccttgaagatgttcctgttaaggttggtaactccataatccctgctgatttcgtggtcctggactat gagaaggaacccaaggatcctcttatccttggaagagcattcctagctacagctggtgctaggtttgatg tgaagagaggtaggatctctctcaaggtttgtgatttggagatggagtttggcatggatggttcagagct tactaagcctatcagtagcattgcctccagcacagacacacctcctcagactgctcagaatcccaacaca gagccacacacaacgctcccatcagctcagctcgccaatgagagttgcagagcaacggtgtcgatcgaca ccaccactcctgtcgatcgacaccctcgggattcacagacagaggattctgcacattctcttcagcccac accacttgaggacctatgtgataagttctcttctatctcttctcctgctttaccttcgattaattcttta gattcttcgaag1