;ID ATHILA4D_LTR DNA ; ATH ; 1165 BP ;XX ;DE ATHILA4D_LTR is a long terminal repeat from the ATHILA4D endogenous ;DE retrovirus - a consensus sequence. ;XX ;AC . ;XX ;DT 31-MAY-2001 (Rel. 6.2, Created) ;DT 31-MAY-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW Gypsy-like endogenous retrovirus; ATHILA superfamily; long terminal ;KW repeat; ATHILA4D_I; ATHILA4D_LTR. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryotae; mitochondrial eukaryotes; Viridiplantae; ;OC Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; ;OC Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 1165) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (May 2001) ;XX ;CC ATHILA4D_LTR is a long terminal repeat from the ATHILA4D endogenous ;CC retrovirus. There are about 20 copies of ATHILA4D_LTR in the genome; ;CC they are ~95% identical to the consensus sequence. ;CC Solo LTRs and proviral copies are flanked by 5-bp target-site ;CC duplications. ;CC There is an 85% identity between the ATHILA4D_LTR and ATHILA4_LTR ;CC consensus sequence. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 1165 BP; 313 A; 201 C; 208 G; 443 T; 0 other; ATHILA4D_LTR tgatatacctcgattttcactgcttttagctatgatttaggtatagtttttagagtccttttgttatttg tagagtcttttctagtctttttcaggtctttacatgtttgggatgcatttggagattatggagcattctg gagcaaaacagacaacttaagctgcagcagcaattcggagacgaaaattgacgtaggtgtcgatcgacac aacccctggtgtcgagcgacaccaatacctgacggcaattcaattgcgcaacttattgatgttttgaaga tttccaaattcggcccagaactttcccttatttctaaagaaggcccagcacgtttttaggacttatatat tgatttttatggtcattgtttagacctaactcttattatctcttttatacttgggagcaaaaccctgtgg agactccctttagagaagattcttctaaactcttttctcttcttaatttcatcattgatttcttattcaa tcatgttttgttcttctatgatcatgcttgagtagttctcttgttgggtttagggattctcattagggat ttggatgaattagtagatcgaaaaccctgttaggataatatatttagaattcttcatcttagattgttct taatgctagttttagagtaactaactagaacttgattttaggataataggtatgcccaccataggtatct attactggaactatcttagatgagcctagtatttagatgcgtgctagcgtccattacttaggtgaactta tcaaacctgattataatgcttgcttagttctagggatttacaagagagttgggatcaatactattaagca tagtgagtttcgcggaacaccaccggttactttatattagtgatttgtgttctagaatggttcgataata atcctaatttactgctagatctactattctgatatttcctgagaatttccctaaacccgacatcttaatc atctgaatctacaaccaattttaattgctttcttgtcttttacttttataatattttctgtttagcttta ttcaaaactgttaatctattgtgtgatccgagaactttgtggaattcgatccctaagtgctataacaacc tctttatttgagagagtagtcattagggtaatttgactcatatca1