;ID ATHILA4C_LTR DNA ; ATH ; 1158 BP ;XX ;DE ATHILA4C_LTR is a long terminal repeat from the ATHILA4C endogenous ;DE retrovirus - a consensus sequence. ;XX ;AC . ;XX ;DT 31-MAY-2001 (Rel. 6.2, Created) ;DT 31-MAY-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW Gypsy-like endogenous retrovirus; ATHILA superfamily; long terminal ;KW repeat; ATHILA4C_I; ATHILA4C_LTR. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryotae; mitochondrial eukaryotes; Viridiplantae; ;OC Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; ;OC Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 1158) ;RA Kapitonov,V.V. and Jurka,J. ;RT . ;RL Direct submission (May 2001) ;XX ;CC ATHILA4C_LTR is a long terminal repeat from the ATHILA4C endogenous ;CC retrovirus. There are about 20 copies of ATHILA4C_LTR in the genome; ;CC they are ~94% identical to the consensus sequence. ATHILA4C is even ;CC younger that is expected given the 6% divergence since its copies ;CC belong to different minor subfamilies. ;CC Solo LTRs and proviral copies are flanked by 5-bp target-site ;CC duplications. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 1158 BP; 317 A; 206 C; 218 G; 417 T; 0 other; ATHILA4C_LTR tgatatgtcctggtttttactgatttctaacatagtttcagaatggtttttagagtctttctagtctttt tcgtatgttttgagtcatttcaggtacacttacacatctgggaactatggagcacaataaggaattttgg aagcttttcagcaatgaagatcttgaaggacgtttttcagaagatggtgtcgatcgacaccacacctgtg tcgatcgacactcttattgctgccaagggaattttcgttttctgccaagtctttgagaagccctgaagtt ttccttatttgcaaagtagtccctgcacgtttttagtcacgaatatacctaattgtttggtcattgttag acctaagttttgttttttagattttgttacacattttgagagaagaatccaatccctttagagaggattc tgaactcctttacttttattcttaattcatcaatgcaaactattcagattatgatttgtgtttctattat catgtctgagtaatcaccttgttgggtttagggagtctcaatagggatttagatggattagtagatcgaa aaccccttaggattattcttagagttcttcatcttgattattcttattgctagttttagattgatcacct agaacttgatattagataataggtatgcccgccataggtacttgttatttgaactatcatagatgagcct aggcatttaagaaagaacaggtaggctcatagaagggctctggtttagatactaggtgaactaatcaagc ttattaacaatgcatgctttagcataggatttctcggcttctctggttatcttagctctaagtatagaga gtttcgcggaacgccaccggttactctagaatcatagtttgagttcgagaacggtgcgataacaatccta atattagctagatctacaatttatctatctcccgagacaattccttagacccgacgctttaatcacttga atctacaactcatttacttgcttatttgtcttttacattcaattacttcatctagcttattaaacaacat cataagtctattgtgtgaacatcgagagctcagtggaattcgacccttaagtgctaacgacgatctctta tttgagggagtaagcttaaggcaatttgagctatatca1