;ID ATHILA3_I DNA ; ATH ; 7410 BP ;XX ;DE ATHILA3_I is an internal portion of ATHILA2 endogenous retrovirus. ;XX ;AC AC005171 ;XX ;DT 09-NOV-1999 (Rel. 4.0, Created) ;DT 09-NOV-1999 (Rel. 4.0, Last updated, Version 1) ;XX ;KW Gypsy-like endogenous retrovirus; ATHILA superfamily; internal ;KW portion; gag; pol; env; ATHILA3_LTR; ATHILA3_I. ;XX ;OS thale cress. ;XX ;OC Arabidopsis thaliana ;OC Eukaryotae; mitochondrial eukaryotes; Viridiplantae; ;OC Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; ;OC Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 7410) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (November 8, 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATHILA3I is an internal portion of ATHILA3 endogenous retrovirus. ;CC It belongs to the gypsy superfamily and is related to the ATHILA ;CC retrovirus. ATHILA3 copies are ~95% identical to each other and ;CC ~70% identical to the ATHILA and ATHILA2 elements. ATHILA3_I is ;CC flanked by the ATHILA3_LTR long terminal repeats. ;XX ;DR Positions 81710 74301 Accession No AC005171 GenBank (rel. 112.0) ;XX ;SQ Sequence 7410 BP; 2328 A; 1526 C; 1542 G; 2014 T; 0 other; ATHILA3_I atttggcgcagttgccaattcattgttacattgttacattcaagatatcagaaaaagttaagattatgtt cttttacatttatcaagttacaaactcatcatttcgtctgcttgtttttgtggtattggtactaatcttt gtgcatgcaaactcggtccaaaggttctgcacacctactaccattcagagacagaattgacagaatagct cgtgagttacaagaaaccaaagcaaaggcagcatgtgatcagcaaagaccagctgctatggatcaacaga acagagtagttgatgttcaagacccacctaatgttgatcaaccatgaaacattggtgctggtgatgcccc aaggaatcatcaccaaagacaagggatagtgcctccaccagttcagaacaaaaactttgagatcaagagt ggtctcaactcaatgatccaaggaaacaagtttcatggtttacctatggaagagcccatggaccaccttg acagctttgataggctctgtggctttaccaagatcaatggtgtcactgaggatatgtttaagctcagact atttcccttctctttgggagacaaggcacaccactgggagaagactctacccctagactccatcaactct tgggatgattgtaagaaagcttttcttgccaagttcttctctaacgctcgcacccctagattgaggaacg agatctcaggcttcacacagtaaaacaatgaaactttctgtgaagcttgggagaggttgaaaagctacac cactcagtgcctccatcacggtttcaagaaagcttcattattgagcacactctacagaggagctttacca aagatcagaatgcttctcgacactccctcaaatggaaacttcctgaacaaggatgtagcagaaggatggg agttggtcaaaaatctagcacaatctgatgggtgctacaatgaagactatgatcgctcagtaagaggaat tggaggtagtgaggataaacagagcaaggatatcaaggctctgaatgaaaagctagacaaggtgttgctg cctcagcagaagcatatacactatatcactgatgaagagaacttccaaatgcaagaaggggggcaaactg aagggctgtgttacatccagaaccaaggagggttcaacaaggggtacaacaactacaagcccaacccaaa cctctcctacagaagcaccaatgtagctaacccccaagatcaagtgtatccaccacaacagaatcattcc caagacttttgttcagtacaaccaaggttatgtccctaaacaacagtttaatggagactaccaacagcag aatccacaacaagccccaccagctcaagatcctgaaattgggcaacttattcaacagatcattcaaggaa aagctactggagctatggcttttgacaagaagatagctgaattacacaacaagatcgatcgttcttacaa tgatctaaatgtcaagttcgaagctctgaattcaaaaatcaagtatgtggagagtcaatttgcatcaacc tctgctccgaagcatcctcaacaacttccagggaaagcagtccataatcctaaggactatgctactgcta atgctatcaccatccaccaagaagatgagtccccaccaagtcatcaaaccctcaatactgaggacagtat ggttcaagaaggggggggggattcaactcaaattgctgcacctgccacccaacaattcaactagattata gagcacacacctttgctgaatactcaccattagcagtgcctccacccaagaaacatacaagaagaaagtc atccaagaaaagcttgatgatccagtttcattcactctaccatgctctctaagaccattgacattcaata ggtgcctttgtgatttgggagcatcttttagccttatgcctctctctacagctaaaaggctacggatcat ggaatacaagttctgcaacttagctttactcttagctgatggttctgttgcacatcctcatggtctaata gaaaatctgcctgtcaagattggaaatgttgagatacctacagattttgtggtattggacgtggatgaag aaggcaaggatcccctgatcctaggcagaccattcttagcttcagctggagcagtcatagatgtcaggaa tggaaaaattaatctgaaccttgaaaaaggcatcaagatgaagttcgacatcagagaagcttcagggaaa tcaacaacagtaggtcagagttttgggattcaggacatggataatgatgaagaaacagaaacagaaaccc caccaagagttaactatacttctcaactcagcaagctgaagagaacttttgaccataagaagagagcaat agaaaggttagctcagactgaagatcctacagaagatgactggtatgagatgagaaaaaaatttaaatgg caaagcagagtcatagagggattatcttcaagggtgatgaagctgaaagatcaactatggatatttcaaa aaagagttaaaaagtttgcaaatactattgatccaaagaagatggaaactgcactagctatcaaggagga cgaagatttcacaacagaatggtttgcaccacaagaccagaaaggagttcacttagaggaaagaagccta gagagcaagttgatgagtgaggaggaaatccctattccgacttattctccaagagtacctaaaccaacca ccaacccctctgctgaagaagaactcttgattcatgattctgttgctgaagaactcctagagctctaggt tggatataaggctcaggaggatacaattggaaggttaactcataagatggaagagttaaatagcaccatt cttgaacttcaagaaatggtcaaggactaccccaactttgaaattgaggattggtcaaaggagcctggtt cagaagaagaagactactctgctgatcagaaagaagcctacttttaagaaaaatcaaatgagtactcatc ctaccatatctcaagagaggatgcatagtatgattcaagcactgaaaattcaaccattgaagatgaggac ttctctgttcctctcttcaacctcttttctgactaagctctataagagtcaagcttagtgacttaaaaca agctcacttgggaggaagtcccatgtctatccatgtacataactatatattttccttgttatttttgatg tttttgtttaagtgtttcaagtttatttcattgatcattatggagtcaacggtcgagtaaattcaaacca agtcgagaaagatctcaaccgttgatcgagtagaatgaggaggagtgttttgagccgttgatttgaatga ccaaatgagagaagcatcaccaccgtttgatcgagtgatttcttgcaattcattctgatccgtttgatcg agtgattaaagatggagcatttctcaccgtccgatcgagtgaagaaaccaaagacaccctctttgtagac accaacgcctcgtgacccgcctccattgaaaagctggtgtacctttgtcttcttgcccccccatattcac tttggtccccccattgcaattcccgaactcaacaacctcatctcttcacctcccataccaaagcaatctc gaatccttacaattctctctttatctccttcacttccctttcttatcaaaaacttttcgcaattcatttg tttcctccatcattccatctcctaacctactgaattttggttttgagtttctcccacttttgttcttgat gacgaacaagcgctcgctttgtcaaggattcgaaacaatgctctctccccatagaagaggtatccaacac cttcttcgcatgcagcagctcgagtaccttctgaaccatcacccttggggttgagcaggagagaacaagc aagtttcgaaaccgatcacagtgaatcgagccaagaggaggaagtgatgcaagaagaaaaactttcagcc ctctgtaaaggaattctcgaggaacaaggcagatatcactcgaggaaagaagcccgtggagaggaggttg gaactggtagatgaaaactccgaggaagaaatggcttcaccagaggaagatgatcaaatagagaaaggag gcagtgatgatttggaataagaaaagtgtgcaactcgaaacgagtactacaagctgctgaagcgcaatgt gtttttaggaactcgataccctcatcccgagaccatggagagactcgacatctatgatgatgcagactat atgtttaagcagtgcaacctcaatattcacatgtttcggccaatggaggggtatgaggaagagaccatcc agtttctttcatccgtggaattgttcttatatggagagtcaaaggacgatgaaatcaggccagacggaag tttgggatacttggagttctgtgtgtatgacgtagagtatcggcttccaatcgagcatctcgagctgatg tatggatttctaagcggaaaagacacgagtcatcgttttgacaagagagagctttagtcattctgggcca cacttgggtctaaacatggattttcatcctttaggaccaagagcaacggaataaggagtctggtggttag atattttcataggtccttagctagtacgctatttgcaagagagaggaatgaaacctttgtcaatggagaa ctagagttgatggagacagctctacaagagctgcttggtttagcatcatatggtatagttctagctggag atcagactaacgcttcggtctcattctacctaatcaagcacctgctaagttacagaggatgggctaaggg acttaagaaaccaggaagaatggttgtgggaggagttgtgacactaattctgagagcttgcaatgtacct ctacatttaaagccgattcccccgagatggattgatatgcaacaccttatcaattccaagagtttttggt cgcagcagaagaatgacctatataagtataggttcgatcaccccacagcaggacaatatatttttctcct cccaaatcccgcttccacttcgattagagatggtggcaacattgagttttgtccaccattagagaacctc tatttttcaggtgatgaacttgtgccgatggaaggaatgaataatgatgagaccccaatccatcattcag ataatgaggcagaacctatggacgtgtcttacgcaacacaacaattttactttgaggagtactccgcacc gagtcaaagtaaagactcaaaggaaattcacaagcgccttggtttcctccagagctggtgtaagttccac aacaaggctctcgcgacactcaacaagaagtttaacaatctccaactcaagatcaactgttcttcttcaa ctacaacaatgccacataacatgccttttgggagaagcggatccactcgtcatgaacctatgcatttcga tccgccttcaccaccaagacagtcgtcatatgagccgagggaacaccatgctgcaccttcaccaccaagg caatcatccttcaaacctagagaaaggaaaagaggagcaagttgaaaaagcgaagaagaacaaggaaatc agatgctggagtaagccactctaccgcaccacttgaggggccactcgatcaacaacccgagaaaagggtc gagcatccagctatccaagttcagcataacccgttccttggagttatacaaaggagagtatggatgattt tgtctcctcctacttcacctgattactgaggtaacaccacctcaaccattgtacataccattagcttttt attttccttttgtgttgtttgttttggtcttgaattctctttcagatttttattacacaggggattgtgt aattgaagtttggaggagggttcaagacatgtttaacattgtgttctcttttcttatttcaaattttgca tcatctaaggatagaaaaaccataaaaatttgaaagaatttcagaaaattatttcacaaaaatagagtgt catgtagattgcatatcattttacgattgtatatagtgtacttgcatttaggattgctcattttcatagg ggataatgatgatttcaaaccgataagcatgttttgattcaataaagtaagttcaatgcccaggttgtta gttctctatgcataaccgattgtatctctgaagtaagactgcaccctgcttctaatttgtaacttgacta tactactttgattcgaaactcgcttatctgatgtcattccctatctattagaacctgaactgaatttgta attatcatgtctatgcattgtttgtgaactcatggctaccatatacatacttggattatcttattcactt caccaccctctgttaatccaagtagatgtctctcatttttagagcagtttcccatacccttagcctagcc ttattttatgccaaagatcatttgtgtctgactgtgaggtctttttcgattgagcttggtataacgtgtt agctatgagccgacaagagcagtctttcatgtagacctagcccacgctttttgggttatctaggactagg tggagacttgtatttgggattgggattgtgaatggattgaatgggaatgagaaagagaatgaaaataaaa agaaaaggaaaaaaaaattgtttagagttcttaagggggatacaaaaaagtgttagtctagtaaagggtt tggaattcaaagaagttaggcattgtgattcaaaaaaaggataaatcgccctatgtgctaaaattagaag aaaagccttaagattttcaaagtataaaaccaaacccgctagactcttgaatcgtttcaaagaagaaccc tttagaacttgaaccaaaagagagaaagaataagaaaaagggtagagttaggacatttgtgggactgcga tcatcttctgagctatcatactatatcattgggtagatgggagtctgttcttgtatgtgtccattggttt ttacctttagcattctgctgaagctcaatcttttctctgagagtcccctgttactcgaccaaatcaatag agggaccatttttgtctcttagcctaagcccgaaaccaagtgagttcataaccattgcattgcttgatcc actgttcgtgcttaatgaatattcaagggaattggttgatgagaatgcttgaatatattaaggcaggttg ttaggttgcattgtgacgagtatggctaacgtttttaagtaaaggtctatcatcttgcaacctagaatta cctacctggacattgagcttacccgttctatatgtatgcttcggtttttgaatccccacctttaaacctc tccttcaacttaagattttttgtttgcttgagggcaagctagagataagtatgggggagt1