;ID ATHAT3 DNA ; ATH ; 4184 BP ;XX ;DE ATHAT3 autonomous DNA transposon. ;XX ;AC AC0035249 ;XX ;DT 29-JAN-2001 (Rel. 6.1, Created) ;DT 29-JAN-2001 (Rel. 6.1, Last updated, Version 1) ;XX ;KW Autonomous DNA transposon; HAT superfamily; ATHATN3; Atac3; ATHAT3. ;XX ;OS thale cress. ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;RN [2] (bases 1 to 4184) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2001) ;XX ;CC ATHAT3 is a recently active autonomous HAT-like DNA transposon. ;CC There are three copies of ATHAT3 present in the genome. ;CC They are ~96% identical with each other. Only this particular ;CC copy preserved nearly complete transposase, two other ;CC copies harbor only C-terminal portions of the transposase. ;CC ATHAT3 has 11-bp terminal inverted repeats and encodes the ;CC 749-aa ATHAT3p transposase. ATHAT3 is flanked by 8-bp target ;CC site duplication. ;CC DNA transposon ATHATN3 is a non-autonomous derivative of ATHAT3. ;CC CDS join(260..356,1205..3350) ;CC ATHAT3p: ;CC XAYQHKSQQAGNPNSFVSAVSFFREVKNSTRSEMDSSANPNNTESNTKGNEDEGRTRPID ;CC NSKGKRKSDVADDGDSANPCKPKKKLQTRSWVWDHFTRKDGDDDQCKCHYYKRFFGCSTK ;CC SGTSNLKKHLDCCKHYSAWKGRQSQNVINQEGNLQSGKVSKEVFREATNEMLVLGQLPLS ;CC FVESVAWKHICSKANLYKPHSRRTATRDIILMNVARKASLKDLVSANKRRVSLTTDIWTA ;CC QATGASYMVITVHFIDEYWRLRKFIIGFKYIADHKGATISRVLLECLTEWGIERIFTITV ;CC DNATANTSALRKFQRALQSQRADSLVLNGDFMHMRCCAHIINLIVKEGLHKLGNHVEAIR ;CC NGVLYVRSSTSRCDSFEQKVVTGKMTRGSLPLDVKTRWNSTYLMLTRAIKFKVAFDKMEA ;CC EDKLYNDHFLEVVDGEKRIGPPTTIDWREVERLVKFLGLFYTATLVVSASSIVCSYKCYG ;CC EIVTIEKNLLGMTHSYDKELREKAVEMREKFDKYWDGQKNINRMLIIASVFDPRQKMEFA ;CC KMCFEKLYGVDTSEAKEMYNSVYDVMKAMLKEYTVIFKGPNTQSSQSNPPSSTAARDTFA ;CC CELAEDSNVEFERMDRSYKEMVNEIRVTDPKDELDIYLKAEVENPKTLPGMEWDVLSWWR ;CC LNSQKYPVLSEIARDVLAMQVSSVASESAFSTSGRLLEPSRSCLTHYMVETLVCLEQWLK ;CC SEIKLSENTFLTNAQLLADIELLDKLEKX ;XX ;DR Positions 92113 96296 Accession No AC035249 GenBank (rel. 119.0) ;XX ;SQ Sequence 4184 BP; 1239 A; 680 C; 844 G; 1421 T; 0 other; ATHAT3 taggcctgggcaaaatacccgaacccgaaaatccgaaccgaacccgacccgtaagatccgatccgaatgc actttggttccctgcctaatacccggtcggatctttctcttttgtaacttcggttctgggttcgggttcg ggtaatacccaagaaccgaaagtacttttctcgatccgaacttatatacacacaatagcattaaccctta cttgccttagcttgttcttcttcccaatttttgatttattaaaccctagagcgtatcaacacaaatcgca acaagctggaaaccctaactcatttgtttctgccgtctcattcttcagagaagtcaagaactcgactcga tccgaggtacttttcatttttctacttctgtgattttgcttttgtttctttgagtcactgattcaaatat gtagtttataattgtaatttcgttttggttttgtatttctctgttgtattcttagttgatttcttctaat ttatctgttttcattagttaaatttttcaatttatttgattctatttttgtatctgtggagaaaaaaaat ctgagtttgtgtgagttttgatctccaaattttcatctcttaccaccaattgatctgttgtgcatcttaa tttttttgaatataaatttacaagagcatcacttacccaaaagcatcgactccctcagattcaaattttg gtgatttagctcaactttaggctcatctacaccacttctaactcaaacgttatattctattaccatgctc tgtttttttttaagttataggactctgttttaagcatcgactttgtttcttttaagtaagcttgtaaata taccttcatattttgatatataacattcacattttatcaaaataaatttgtccgactctcttttatatgt tgacagttgtgtgtgtgtatgtgtttgatccaattgttttaaaattattaatagtaagttcactggatcg tgaataatatagtttggtatgtatgcatccaagagtcttatagactattaattcattaattcctagtatg catccaacgtgtgatagattgcattattaagtgtaactagactattaagttatagtttcatgctagtgct gcaacgtgtgatagcttactttattaagtattattcttattcaattgttaaccgattattgtttatattt tttttcttttgcagatggattcttcagcaaatccaaacaatactgaaagtaacacaaaaggaaacgaaga tgagggtaggactcgacctattgataacagtaaagggaagagaaaaagcgatgtcgctgatgatggtgat agtgctaacccttgtaagccaaagaagaagttgcaaacaaggtcttgggtttgggatcacttcacgagaa aagatggtgatgatgaccaatgcaaatgtcattactacaagaggttctttggatgttcaacaaaatcagg gacttcaaacttgaagaaacatttggattgctgcaagcattactcggcatggaaaggacgccagtctcag aatgttattaatcaagagggaaatctacaaagtggaaaagtttctaaggaagtttttagagaggctacga atgaaatgcttgttttgggacaactgccactttcatttgttgaaagtgttgcttggaaacatatatgcag caaagctaatctctacaagcctcattcaagaagaacagctactagagatattattttaatgaatgtggcc agaaaagcatctctgaaggatttggtttcagctaataaacgtagagtgtctcttacaactgacatttgga ctgctcaagctacaggtgctagctacatggtaatcactgtgcatttcattgatgagtattggcgtttaag aaagtttatcattggctttaagtacatcgcagatcacaagggagctacaatatcaagggttctacttgag tgtttgactgaatggggaatagagaggatatttaccatcacagttgacaatgcaactgccaatactagtg cactcaggaagttccagagagctttacaatcacagagagctgattctttggtgttaaatggagattttat gcacatgaggtgttgtgctcatatcatcaacttgattgtgaaagaaggtctgcacaaattgggtaatcat gtggaagccatccgcaatggagtgctatatgtgagatcttctacttctagatgtgactcatttgagcaga aagttgtgacaggtaagatgacaagggggagtttgcctttggatgtcaaaacaaggtggaattccaccta tttgatgttaacaagagcaatcaagtttaaggtggcatttgacaagatggaggctgaagacaagttgtac aatgaccacttcttggaagtagtcgatggggaaaagaggattggaccgcctactacaattgattggaggg aagtagagaggttagtaaagtttcttggcttattctacactgctactttggtcgtttcagcgtcaagtat tgtttgctcttacaagtgttatggtgagatagtcaccatagaaaaaaatctgctgggaatgactcatagt tatgataaagagttgagggaaaaagctgttgaaatgagggaaaaattcgacaagtattgggatggacaaa agaatatcaataggatgttgataattgctagtgtgtttgatcctagacagaaaatggaatttgctaaaat gtgctttgagaaactttatggtgtagacacttcagaagccaaggagatgtataattctgtttatgatgtc atgaaggctatgctgaaggagtacactgtcattttcaagggaccaaacacacaatcatcacagtctaatc cgccttcatctactgctgccagagatacttttgcatgtgagttagctgaagatagtaatgttgagtttga aaggatggacaggtcatataaagagatggttaatgaaattagggttactgatcctaaagatgagttagat atctatctgaaggcagaggtagaaaatcctaagactcttcctggaatggagtgggatgtcttgtcttggt ggagactcaatagtcagaagtatccagttttatcagaaattgcaagagatgtacttgcaatgcaagtgtc atctgtcgcatctgaaagtgcttttagcaccagtggtcgtcttttggagccaagtagaagctgccttact cattatatggtagagactttggtttgccttgagcagtggttgaaaagtgaaatcaagctgagtgaaaaca cttttctaacaaatgcacaacttcttgctgatatagaattacttgataagcttgagaaaggtaactttat ctatgtagtttactagttttagttttagatgttgtttgaaaactctcttatgttctaacacaacttgggt gttgattgaatctttttcagagtttcaaactgaagtgaacttggactaaaagactaatcaaggaaacgac tacaaggtaacttcatcactccattttgttttcttttacttctgaacttggtttatagctcaatgttaat atactagactcatgaatcaacgatcatttcgtatttgacttttacttggtttatggtttaatgtttactt atggttttttatttttcaactgagcttatttggttttgatgtaacaggaacaagtcatgaagaatctatc atgtttggatgttgctttggatttgaacttctttctttactttgaatgctttggatttgattctgaacga tggttttatgtcttgctttggatttgaacttctttcttctatttggatggttttatttggatgttttgaa tcttgctttttggttgaacgtgtgaaacttttattatgtcatgctttattgattttacttcaagtttttt ttattacaaatttacaggttttatggtatatgtggttagtatcaagtatgttcgggtagttatgaactag tatccaataatattcggttacttttcggattttcaatggaagtaccaatacctacccaaacccaaaatat accggaccgaacccgaaccgaagttttcaaatacccgaacggggtctaaaattatagttccgaaaaatcc gaacccgaaagaaccgatccgaacccgaaccgaatacccaaacgcccaggacta1