;ID ATHAT2 DNA ; ATH ; 3573 BP ;XX ;DE ATHAT2 autonomous DNA transposon. ;XX ;AC AL132953 ;XX ;DT 08-JAN-2001 (Rel. 6.0, Created) ;DT 08-JAN-2001 (Rel. 6.0, Last updated, Version 1) ;XX ;KW Autonomous DNA transposon; HAT superfamily; transposase; Atac2; ATHAT2. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;RN [2] (bases 1 to 3573) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (January 2001) ;XX ;CC ATHAT2 is a fossilized HAT-like autonomous DNA transposon. ;CC There are at least two almost complete copies of ;CC the transposon fossilized in the genome. They are 93% identical ;CC to each other. ;CC ATHAT2 is flanked by 8-bp target site duplications. ;CC ATHAT2 has 14-bp terminal inverted repeats and encodes the ;CC 656-aa ATHAT2p transposase. ;CC CDS join(349..414,742..1098,1204..1615,1697..1978, ;CC 2041..2871,2960..2982) ;CC ATHAT2p: ;CC MEFLSSLSSQSPPSEASSNRSRMDSSPFPSNSDVGNEKVTEPESDAANKRKDVQEDSGAT ;CC SKPPKTKKPSQRSFVWDHYTRFEDNPKRCKCNYCHRTYGCDSKDGTSNLKNHLRICKHYQ ;CC AWSQKAKQTVFNNQGHLQSGKVNLYAPHSRRTCMKDIVKMYVGMKASLKTWIATTNPRVS ;CC LTTDIWTAKATVASYMVITAHFVDSAWKLRKLIIGFKYITDHKGATIARILLECLAECGI ;CC EKIFTITVDNETTNTSALKKFQETFSLRSNEAFVLEGEAIRNSVQYVRSSTSRCDSFDQK ;CC VVSGKMTRGSLPLDIKTRWNSTYLMLKRAMEFRLAFDKMEAEDKLYNDYFNEVDDGKARS ;CC GHLQELIGMQSRVASYKCYGEIVTIETNLVSLGNNFDRDLKIKAKAMLGKFVKYWDGTRN ;CC INVYLIVASVFDPRKKMQFANMCFAKLYGKDTTDAKEMAEKVNNVLTSLFKEYSSRFQKT ;CC SSGSGPSSQSTQTSITASQGEPSDLMSDSMGYERMDFAYKELVDEIGVDDGRDELDVYLK ;CC EKVENPKTIIGLEWEVLSWWKLNCGRFPVLSAITKDVLAMQVSSVASESAFSNSGRVIEP ;CC HRSCLTHYMVKVLLCTEQWMKNVNHLGNKSVVTIKELLADIVELDNIEKEFDGNSA ;CC ;CC The ATHAT2 70-bp 5' and 140-bp 3' termini are ~70% identical ;CC with corresponding termini of the non-autonomous transposons ;CC ATHATN1-ATHATN5. ;XX ;DR Positions 34952 31380 Accession No AL132953 GenBank (rel. 119.0) ;XX ;SQ Sequence 3573 BP; 1077 A; 581 C; 745 G; 1170 T; 0 other; ATHAT2 taagcctgggcgtttaatccgaatccgataaaccgaaccgcatccgaactgggaaaatcggattaaaaac cgaaccgaatccgctcaattaaccgttcggttattgatttctatatccacggttatcggattttatccga tccgaaccgaaataatatggctatccgaaaccaaccgaagaacttcttctatacactactctttagcctt cgaagtctggatccacttcccttatgatgattatcaaacaatatgattcgatccacttccctaatcttct tgattttcctagcaatacgggatccacttcctctagattataaccataaaaccctaagctctttcaatat ggaattcttaagctctctttcgtcacaatcgcctccatcagaagcatcaagcaatcgatctcgggtatgt gtttgaacttcaattcttcttcttcattagctatcgtctttgttctttgattcttcttcttcattagaaa aaaaattgaaactcatttaaattgatttagtcatatagctaatgataaattctttgtttggattttaaaa atttgtgtatgttggagttaaattcttagtcgattctaatcctcttgttgtgtcaatggatgtttgttga gtagcaagagtatatttttgattgtgagagtatagttttgagtagtgaacgtatatttagatggattctc attattcttatgttaaaacttctcattattcttatgtttagatggattcatcaccatttccaagcaacag tgatgtggggaatgagaaagtgactgaacctgaaagtgatgctgctaacaaaaggaaggatgttcaggaa gatagtggagctacttcaaaaccacctaagacaaagaaaccaagtcaaaggtcgtttgtctgggaccatt acacgagatttgaagataatcctaagagatgcaagtgcaactattgtcacagaacctacggatgtgattc taaagatgggacttcaaacttgaagaatcatcttcgaatctgcaagcattatcaagcatggagtcagaaa gcaaaacaaactgttttcaacaatcagggacatcttcagagtgggaaagttacataggagattttaagag aagcttcaaatgagatgcttgtgctgggagaattaccactttctttcattgaaagcgcggcttggaaaca tttatgtgaaaaggtaaacctctatgcgccacattctaggagaacttgtatgaaagacattgttaaaatg tatgtgggaatgaaagcatctctgaagacttggattgcgactactaatccaagagtctctttgacaacag acatctggacagctaaagctacagttgctagttacatggtgattactgctcactttgttgattctgcttg gaaattaaggaagctaatcattgggtttaagtacattacggatcacaaaggtgcaacaatagcaaggatt cttcttgagtgtttggctgagtgtggaatagagaagattttcactatcacagtggacaatgaaacaacaa acacttctgctttgaagaaatttcaagaaacattcagcttaaggagtaatgaagcatttgttttagaagg cgaaggtatgcatgtgaggtgtgctgctcacataatcaatttaattgtcaaggagggtttggttgaattg ggtgatcatgtggcagccatacgcaattcagtgcagtatgtgaggtcttctacttcaaggtgtgattcat ttgaccagaaagttgtctcaggcaagatgactagagggagtttaccgttggacatcaaaacaaggtggaa ctctacttacttgatgctgaaaagggctatggagttcaggttggcatttgataaaatggaagctgaagat aagttgtataatgactacttcaatgaagtagacgatggaaaagcaagatcgggccacctacaagagctga ttggaatgcagtcgagaggttagtgagatttctgatcatattctacaactccactttggtcgtgtctgct tctaattcagtagcttcttataagtgctatggtgagatagtgactatagagacgaatttggtgtcactag gcaataattttgacagggatctgaaaattaaggctaaagctatgttaggaaaatttgttaagtattggga tggaacaagaaacattaatgtttatctgatagttgcaagtgtctttgatccaaggaagaaaatgcagttt gctaatatgtgttttgcaaagctttatgggaaagatactactgatgctaaagagatggctgaaaaggtca acaatgttttgacttccttgtttaaggagtatagtagtcgttttcagaaaacatcaagtggtagtggtcc atcatcacagtccactcagacttcgattactgctagccaaggtgagccctctgatttgatgtctgatagt atggggtatgagaggatggactttgcttataaggagttggttgatgagattggggttgatgatggtaggg acgagttagatgtgtatttgaaggagaaagtggagaatcctaaaactatcattggattagagtgggaagt actttcttggtggaagctcaattgtggtaggtttcctgttttgtctgcaataactaaggatgtccttgca atgcaagtgtcatcggttgcatctgaaagtgcttttagtaacagtggtcgagtcatagagccacatagga gttgtttaactcattatatggttaaagtgttgttgtgcacagagcagtggatgaagaatgtgaatcactt aggtaataaatctgttgttaccattaaagagttgcttgccgacattgttgagctagataacattgaaaaa ggtaaattcatcccttatgctctatttcaattctctcttaatagttttaattgttcacagttttaatttc ttgtttttcttgattacagagtttgatggcaactctgcttagaagactcttatcctcaaactttttaatc ggctataaggtaaattgttttaaacttgatgtttttgattcatgtatttcatagattaagaagttaagta ttttgttgtatcaaggttcaagaacatggtgaagtttgagaatgcggcaaagaagaagcttgaggttgct gttgttggcttgttttcactctctttcacttttttttttactactttccaattgaattctgctacttctt cactctttaagatgttatggtttacttttctttcaaaactttgatgtattggcatagtttatgcctcact ttggtttcaaaaactttatggtttgctttgctatggtttcatttcatctactcattttttgcatagctcg ttttttcggtttaagttcggattaatatcggttattcgggttcaatcggatgttaaatatcatattcata ccgatccaaaatccaaaatatctaaaccgaaaccgatccgaattttataattatccatatggatattaga atctaaatccaaaataaccgaaatccgaaacaaccaaaccaaatccgattcgataaccgaacgcccagac cta1