;ID ATHAT1 DNA ; ATH ; 4060 BP ;XX ;DE ATHAT1 autonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 03-NOV-2000 (Rel. 5.9, Created) ;DT 03-NOV-2000 (Rel. 5.9, Last updated, Version 1) ;XX ;KW Autonomous DNA transposon; HAT superfamily; Atac1; ATHAT1. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;RN [2] (bases 1 to 4060) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (November 2000) ;XX ;CC The consensus sequence was reconstructed based on five copies ;CC present in the genome. They are 98% identical to the consensus ;CC sequence and are flanked by 8-bp target site duplications. ;CC ATHAT1 has 20-bp terminal inverted repeats and encodes the ;CC 725-aa ATHAT1p transposase. ;CC CDS join(674..1427,1520..2454,2566..2893,3756..3913) ;CC ATHAT1p: ;CC MTQRKKVCEPEASKTQRRSKGDEASASKTERRKKSEAEAPKKPKKVFEISDEDEDDDDEE ;CC DDDGDNGADDVDDDEDNGKSSKPKKRRQYSKVWNDFIVIKKVNHLGKSEERAMCKHCKSD ;CC YAYNAHKNGTNTYRRHLQICKLVPRNGDISQMMVNAEAKFQARKIDQSVFRELVAKTIIQ ;CC HDLPFSYVEYERVRETWKYLNADVKFFSRNTAAADVYKFYEIETDKLKRELAQLPGRISL ;CC TTDLWSALTHEGMNLAMEILGKLKDWGIEKKVFSITVDNAGNNDTMQEIVKSQLVLRDDL ;CC LCKGEFFHVRCATHILNIIVQIGLKGIGDTLEKIRESIKYVKGSEHREILFAKCMENVGI ;CC NLKAGLLLDVANRWNSTFKMLDRALKYRAAFGNLKVIDAKNYKFHPTDAEWHRLQQMSDF ;CC LESFDQITNLISGSTYPTSNLYFMQVWKIQNWLTVNESNQDEVIRNMIVLMKERFDKYWA ;CC EVSDIFAIATVFDPRLKLTLADYCFAKLDISTREKRMKHLRAQLRKLFEVYENKSNAVSP ;CC TTESREDVTHDDETAKGNFSNYDDFFAFRKANVVANGKSTLDMYLDEPAMNVKGFESLDI ;CC LNYWKDNGPRFGKLASMACDILSIPITTVASESSFSIGTRVLSKYRSRLLPRNVQALICS ;CC RNWLKGFESYENVSSICTADTCVAMSEWVERPSSNTALDEILPCTDNATAQESLMRSREM ;CC PAGRP ;XX ;DR [2] (Consensus) ;XX ;SQ Sequence 4060 BP; 1238 A; 666 C; 910 G; 1246 T; 0 other; ATHAT1 tagagttgtcaagcgggccgctagcccgcgggctttgtccaagtagcccatggcggagcgggcttggacg ttgatttttttgtccacaaattagcgggcctcgcgggcaggcccattacggactgcggattatagcagac aagcccgttgcggactgcgggtatgcgggtagcccacgaaagaaaaaccaactcttttaaaacccttcat ttctcatagaggctttcaaaccttttctctctattagagtttcttgtgcagttcaaaccctagaagtagc agttcacgctcaattgcttaacaaggaaactgaaaagtcattctctatctcttcaagtttcttttttacg atcattgaagcttcttagattcagatttcagatcaaaacagagcatctaacacttgtaatggtatgttat ttgtgactacacataaacaattagatgttttacttttgtttgattgatttgctagtcttgactagttttt gtattttgttaatgataggatccgttggattctgttgatgctgagtatttgagatcattagatgtggaat ctcggagagtcattgagttggaacaagctagatatgaacaacaacaagctaatgatgaagcaggaggatc taaaaagctgaaaagaaaactgagagatgaaacaggaacacctatgacgcagaggaaaaaagtgtgtgaa ccagaagcatcaaaaacccaaagaagaagcaagggtgatgaagcttctgcctctaaaacagagagaagaa aaaagtctgaagctgaagcacctaaaaaaccgaaaaaagtttttgagattagtgatgaagacgaagatga tgatgatgaagaagatgacgatggggacaatggagctgatgatgttgatgatgatgaggacaatggaaag tcatcgaaaccaaagaagagaaggcaatactcaaaagtctggaacgatttcatagtgattaaaaaggtta atcatttgggaaaaagtgaagaaagagctatgtgcaagcattgcaaatcagattatgcgtacaatgcaca caaaaatggtacgaatacatatcgacgtcatttgcaaatatgtaagctcgtgcctagaaatggtgatatt agtcagatgatggtgaatgcagaagcaaaattccaagctagaaagatagatcaatctgttttccgggaat tggtagctaagacaattatccaacatgatcttccattttcttatgtggagtatgagagagttagagaaac gtggaagtatttaaatgcggatgtcaagttttttagtcgaaacacagctgctgcagatgtttataagttt tatgagattgagacggataagctgaagagagagttagctcaacttcctggaaggattagtttaactacag atttgtggtctgcgctcactcatgaaggttatatgtgtcttacagcacattacattgacagaaattggaa gctcaataacaagatcctagtttttgtgcattccctccaccgcatacaggaatgaacttagcgatggaga tacttgggaaattgaaggactggggaattgagaagaaagttttctccattacggtagacaacgcgggtaa caatgacacaatgcaagaaattgtaaaatctcagcttgtactccgagatgatttgttgtgtaaaggagag tttttccatgttagatgtgcaactcacattctcaacatcattgttcaaattgggctgaaagggattggtg atacattagaaaaaattagagagagtatcaagtacgttaaaggatcagaacatcgtgagatcttatttgc aaagtgtatggaaaacgttggtattaatctgaaagctggtttgttgttggatgtggcaaataggtggaat tcaacattcaagatgcttgatagggctctgaagtatcgagctgcatttggtaatctcaaagtcattgatg ccaaaaactacaaatttcatcctacagatgctgaatggcatcgactacagcaaatgagtgattttttaga gtcgtttgatcaaataaccaatcttatatcaggttcgacatatccaacttcgaatttgtattttatgcaa gtttggaagatccaaaactggttaacagtgaatgagtccaaccaagatgaagttatcagaaacatgattg tcctaatgaaagagaggtttgataagtattgggcagaagtaagtgatatctttgcaatcgctacggtatt tgatccgaggttgaagcttacacttgcagattattgttttgcaaaactagatatcagtactcgtgagaaa agaatgaaacatttgcgtgctcaactacgtaaactttttgaagtttatgagaacaagtccaatgcggtat cacctacaactgagtctcgtgaagatgttacacatgatgatgaaactgcaaaagggaattttagcaatta cgatgtaagtttcttatgttttgtttttgttagttaatatgcagttttttttatgaaaaacagcaagtca ttagtttttatgttatgttattttgatttcttatctttgttataggatttctttgcttttcgcaaagcaa acgttgttgccaatggaaagtcgacgttggatatgtacttggatgaaccggcaatgaacgtaaaagggtt tgagagtttagatattctcaattattggaaagataacggtccacggtttggaaaattggcttccatggct tgtgacattctaagcattcctattacaacagttgcgtccgaatcatcgtttagcatcggaactcgagttc taagcaagtatagaagtcgtcttttaccgagaaatgttcaagcattaatatgcagtcgcaattggttaaa aggttttgaatcttatgaaaatggtaagtaagttgtttttcataagttttatagtcacacaatcttagtc tatgaattaacattgttagtttgtatgatatttgtagaggagtatgaaaaatttgatgctgaagatgaga ctctaccttccttccagtcgcttgtggatgatgcagatggatgttgagttgcagattttattttaagttt gatattcatgtttggatttgagtttaagttcatgtttcagttatcatgtttgcgtttaagaagttgcagg tctttctcttgacttaagttcattttctgtttcacatttgagtttaacttgttacaattaaggtttgaat atgagtttaagttcagattaaggtttacaaatgagttgcaagatgagacacgacattgttccttttggga tattttggatttgagtttaagttaaggttctgatagcacgatttcgcagcttagagctatctcagattat cttgcttcagccaagcaggctgcagttcttcaggttcttttacctgcaaatgtacaaactgaaatcgatc agatcggagcgaaactggattcttctgtagctactatcactgagaaatcgactagtaactccaatcacat aagacatttccttgattctgtgtaacaaactcctcctaacagtctatctgttacagaatctttggatttt gaaaaacaaatgtataatagtcatttctgtactcgcaggagagtggcgcttatcgtagtttcaatcgtca tgcttgtggtgacttttcttggtctcggtaatgttttcatctttgactacatgtttctcaactatcaact aatgtattgaccttagtgatcttgttatcatttcttctcctgcagtttcttcgatttgtactgcagacac atgtgtggcaatgagcgaatgggttgagagaccatcaagcaatacggctctggacgagatattgccttgt acagacaatgccacagctcaagaatccttgatgcgtagcagagaaatgcccgcgggccgacccgtatatc cgctgggctttgcgggccgggcttggacactgataattttgtctgcggtcctaaacgggccaacccgtcg cggcccgaaaaaagaaagcccactgcggggcgggctagatgggcgcgggccggcccgtctgacacctcta 1