;ID ATGP9BI DNA ; ATH ; 2380 BP ;XX ;DE Internal portion of ATGP9B gypsy-like retrovirus. ;XX ;AC AL021811 ;XX ;DT 31-MAR-2000 (Rel. 5.4, Created) ;DT 31-MAR-2000 (Rel. 5.4, Last updated, Version 1) ;XX ;KW LTR retrotransposon; retrovirus; gypsy superfamily; gag; ;KW ATGP9BLTR; ATGP9BI. ;XX ;OS thale cress ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 2380) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 2000) ;XX ;CC ATGP9BI is an internal portion of ATGP9B, a gypsy-like ;CC retrovirus which was active recently since its LTRs ;CC (deposited in Repbase as ATGP9BLTR) are 99% identical to each other. ;CC ATGP9B has induced a 5 bp-long target-site duplication upon its ;CC insertion in the genome. ;XX ;DR Positions 63555 65934 Accession No AL021811 GenBank (rel. 116.0) ;XX ;SQ Sequence 2380 BP; 727 A; 380 C; 582 G; 691 T; 0 other; ATGP9BI ctggtatcagagccaagcgtttcctcggaatcaatggcagaaactcgttcgcagatgttttatcgggagg tttcagctattcacgaaactatgtatccgtcattgaaagtggtttgtggtcacaaatctgatgtgcgttc cggcaaagcggcgacgacgaatcagcaatttggtgttcaatcctcaccgtgcatcggagaatcaatgttg gatacgagagcttacaacattggaagatcctcacagctgatatctacagctccgatcgtcactcctgaca ccagcaaagagagagtcggtatgtcgaacaaatattttccattggaagagagatctgattttgcgagact tgagcatctcagatttaatggtgatagaattacagaatggttgttccagattgaacaatttttcttaatt gatcgtactccggaggaattgaaagttggcttcgcttcactccatttcgatgacactgctgcgactttgc accaatcaattgtacaatcgatgtggtggaagcatgttaggcatgattggtggagttacaaactgttgtt gcaagtgagatatgatgagcatgttaatgactcgattgcaaaactgacacagttgcaggagactgaagga atagaggagtatcatgctcgatttgagttgattagcactagattgaacttcgctgaagattacttggtta gtgtttacttggcaggtttgagaactgatactcaactgaatgttaggatgtttggacctcagacaattca acaatgtttaatgttgggaagattatatgagatggctcacccaaagagtgtgcttatcagaaaaaagagt gatgattatcagaaagaagctcaacatgtttcaagtaatgctgcaggaacttctatgattaatgatggta attgcatgataggtaatgatggagatcgattccttagtggttcagacttggtagagaatgcggttgcgac ggtgaagaaatatttggttgaaattgatgatgctatgtctagtgatgatgatcaaaattcggatgctggg gacgtctttggattcaacatagaagagtgtgaaacagattcatggattgaacataagccgttgattcaag atcaagccgcgtttcactccatagacatagaaggtgtctcacaacttcagaaggttcgttcaaaccttaa ggattttgataaagttgatgcaacaatgaatcaaatgctgtcatcaattggatttgttgttgatgaatta cactctagttgtggaagtgctaccgtccatgtccagaagaagcctagtaagtctctcaaatcctggaagt tcaaatttaaaaccagctcacaagaccaaggggatcatgaatcacttccaatagggttacatatcagatt caagtcctggaaatttaagttcgtgaatagaaatttacaaatgatgagagaacatggatatacaacacac tttcagctaatgtctgataagagagaacatcaagagatgttcattgtggccaggattgttgatgtgagat gtttgcttagcatgatacttgggataacagagagtgatgcaggtcatggagaacaatttgtgtatgaccg gattacaatggtaaagaggctgctgttgcaaaccagtttagtcattcaagaagtgatgagaaacaaaaag atcaagtttaccaaacggtggtggttcaagtataaatttggggaagagggtttcacgagactgaattctt tcaatttgcgtatgacttatcattttgcggtttggcattgttggaagagcaagaccatggtgcatgttga aatgagtggtgatcactggtcttggatggtcttagtcatgaaatctacaacatctagctttttgtcactt ctctatgatcgaagaatgggagatccaagcagacatgaaacgggtcgggagattgtgtcacttcagggtc aaattcacactggttctcctatgattcagtgcataaagatgagcttcagcattctccttcttcagggtct gtttcagagtttgacaatgaagatgctcacatatatgcacttgtttggtagcaaaagttgtgtttcaact ttgggagtgaggaaattaggcaaagattggtggtttaaatacaagacagatgcaagggctacagatttac tgacaaatccgtagaaagagtaactacgaattagacaacagaggatgatgaagttgtcacaagcttggcg attcaaggtttaggacttggtaaaaggaaagctatgattcatgttgatttatgtggaagaggctacatgg agttactctataaactggcaaatatgtttccatgaaccttgaggtcaaggttctctgaagaggggagatt 1