;ID ATGP5I DNA ; ATH ; 4801 BP ;XX ;DE Internal region of ATGP5 gypsy-like LTR retrotransposon. ;XX ;AC AC005561 ;XX ;DT 12-APR-1999 (Rel. 3.2, Created) ;DT 12-APR-1999 (Rel. 3.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; gypsy superfamily; gag; pol; ATGP5LTR; ATGP5I. ;XX ;OS thale cress ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Charophyta/Embryophyta group; ;OC Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; ;OC Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; ;OC Arabidopsis. ;XX ;RN [1] (bases 1 to 4801) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATGP5I is a gypsy-like gag-pol LTR-retrotransposon that was active ;CC recently since there is only 2% divergency between its LTRs; 5 bp-long ;CC target-site duplication. ORF1 and ORF2 encode gag and pol-like ;CC polyproteins. ;XX ;DR Positions 68060 72860 Accession No AC005561 GenBank (rel. 109.0) ;XX ;SQ Sequence 4801 BP; 1500 A; 820 C; 1097 G; 1384 T; 0 other; ATGP5I gcatcacagccacctctatccatttctcaacctaagagtgccgagtccttgggaggatctcatcatgtgg tatcagagcacactctgaaagttgagttttccatcgttatcattttgtatattttcatctttagatctgt gtccgtctgtcaccttgatttaattttcataattatttggtgcatgctaaaattgcgaaattaactgtca cgggtttgaaaaatactctagtattttttaaaattgtttctggaatttttgggaacgttatgataatatt tagcatccgaacaagtgaaactgtcgtaattagggttctagggcatctgaagggttatttcgtgtttgtt taaaaagaactagttactggtgttgttttgttgtctctattgcagaaagaatggctgaatctgaggagga agagactagccacaatcgaaacaacaaacttttggtggaagcctttgagaaaatgatggataccaaactg aatgcttttcgccaagagtttcatgagaaactagagttggggcagactcgtcctcgagaatgaaggagag ttaatgagccgcttgagcaaagagatgaagctacagatcagtactatgggcataggagcacttcatctca caatagtcaaaggagacaccatagacgtgctagagaaggtagagatcttttgcaagacaatcttggaggt cttaagcttaaaattccaccattccatggaaagaatgatccagatgcttatttggaatgagaaaagaaga ttgaattggttttcaaccttcaacactacaccgagatcaatagggtaagagttgctgctactgaatttta tgactatgctttgagttggtgggatcagctagttacttcacggagacgtaatcaagagcttccattggaa tcttggtccgaaatgaaagctattatgaggaagaggttcgtccctagtcactaccaccgagagctgcatc tcaagttgaggaatcttacacaagggaaccgttctgtcgaagagtactacaaggaaatggagactttgat gttgcgggctgatatttctgaggatagagaagcaactctgtcaaggtttcttggggatttaaacagagat attcaagacagattggagactcaatactatgttcaaatagaagagatgttgcacaaggcgattttgtttg agcagcaagttaagaggaagagttcttcacgatctagttatggttcaggaaccattgctaagcctactta ccaaagagaggagagaaccagcagctatcataataagccgattgtcagtccaagggccgaaagtaaacca tatgctgcagttcaagatcacaaaggaaaggctgaaatttctacatctagagttcgtgatgttagatgtt acaaatgtcaagggaaaggacattatgctaatgaatgtccaaataagagagtcatgattctcttggataa tggagaaatagagcccgaggaggagattccagattcaccttcttcattgaaagagaatgaggagctgccg gctcagggtgagttgttggtagctaggagaactttgagcgtccaaaccaagaccgatgagcaagaacaga ggaaaaacttgtttcacacgcgttgccatgtgcacgggaaagtttgcagcctcatcatagatggagggag ttgtactaatgtggcaagtgaaactatggtcaagaaacttggattgaaagtgcaaaaacatgcgaaacca tacgatctttagtggcttaatgacagtggaaaaatgagagttaaaaatcaagtggttgtgcccattgtca tcgggaagtatgaagatgagatcttatgtgatgtattaccgatggaagctggacatattcttcttggaag gccgtggcaatctgatagaaaggtaatgcatgatggtttcactaatcgtcattcctttgagtttaaagga gggaagactattctggtctctatgactccacatgaggtttatcaagatcaaatacatctgaaacaaaaga aagaacaagtcgtcaagcagcccaacttctttgcaaaatctggtgaggttaagagtgcttattcttctaa acaaccaatgttattgtttgtttttaaagaagctcttacgagcttaactaactttgcaccggtgctgccg agtgaaatgacttctcttttgcaggattataaagatgtatttcctgaagacaacccgaaaggactaccac caattcgtggaattgagcatcagatcgattttgtgccaggagcttcacttccaaaccgaccagcatatag aaccaatccggtggagacaaaagaactacaaagacaagtggacaagcttatggagaaaggacacattaga gagagcatgagtctctgtgccgttccaattttgcttgtgccttaagaaagatggcagctggagaatgtgt tttgattgcagagccatcaacaacgtaacggttaagtattgccatcccatccctagattagatgatatgc ttgatgaattgcatggttctagcatattctctaaaattgatcttaaaagtggctatcatcaaattaggat gaacgagggagatgaatggaaaactgcatttaaaacgaaacatggtttatatgagtggttagtcatgcca tttggattaactcatgcacctagtacattcatgaggttgatgaatcatgttctaagagcattcattggaa tatttgttatagtttactttgatgacatcttagtttacagcgaaagcttgagagagcatatagagcattt agattctgttttgaatgtccttagaaaggaagaactttatgccaacctaaagaaatgcacattttgcaca gataatcttgtgtttttaggctttgttgtgagtgcagatggagttaaggttgacgaagagaaagttaagg ctattagagattggccgagtccaaagactgtgggagaagtaaggagtttccatggccttgctggatttta taggcgatttttcaaggactttagtaccattgtcgcaccactcaccgaggttatgaagaaggatgtagga ttcaagtgggagaaagcacaagaagaagcgtttcagtctctcaaggataaactaaccaatgcacctgttt tgatattatctgagtttcttaaaacgtttgagattgagtgtgatgcatcaggtataggtattggagctgt tctaatgcaagatcaaaagcttattgcctttttcagtgagaaacttggaggagctacgctaaactaccca acctatgacaaggagttgtacgccttggtccgagctctccaaaggtggcaacactacctatggcctaagg tgttcgtcattcacactgatcatgaatcgctaaaacacttgaagggccaacagaaacttaacaaaagaca tgcgaggtgggttgagtttattgagacatttgcctacgtcatcaagtacaaaaaaggtaaggataatgta gttgccgatgcattatcccagaggtacaccctactctctactctcaatgttaagcttatgggttttgaac aaataaaagaagtttatgaaactgaccatgattttcaagaggtttataaagcttgtgagaagtttgcttc tggtcgttattttagacaagacaagtttctcttctatgagaaccgtttgtgtgtacctaactgctctcta cgagatctatttgtcagggaagctcatggaggtggactaatgggacactttggcattgccaaaacgttgg aagtcatgacagaacatttccgttggccacacatgaaatgcgatgttaaaagaatttgtgggagatgtaa tacttgtaagcaagccaaatctaagattcaacccaacggtttgtatactcctttacctattcctaaacac ccctggaatgatatttcaatggattttgtgatgggattgcctaggacaggaaaggattctatctttgttg tggttgatagattttctaagatggctcatttcattgcttgtcattaaactgatgatgcattgcatgtagc taatctattctttaaagagatagttcgtttgcatgggatgcctaggtccatagtttcggatagaaatact aagtttcttagttacttttggaaaacattgtggtttaagttaggaactaagctgttattctctacgacat gtcatccgcaaactgatggtcaaactgaagtggttaatagaaccttaggtactctcttgcgtgcattgat taaaaagaaccttaaaacttgggaagaatgcttaccacatattgaatttgcatataatcatgccatgcat tctgcttctaagtattctccttttcaaattgtttatgggttcaaccccatctcaccttttgatctaatcc ctttgcctttgagtgaaagagtaagtattgatggtaaaaagaaggctgagctagtgcaacagatccatga gaatgcgaggagaaacatagaagaaaagaccaaactctatgctaagcaagctaataaagggagacgagaa caaatcttcgaagttggagatatggtgtggattcacttaagaaaggagaggtttccagctcaaaggaagt ccaaactcatgccaagaatagacggtccattcaagataatcaaacggatcaacgacaatgcctaccaact cgatctgcaaggtaagtataatgtgagttctagcttcaatgtttctgacttggtaccttttattgcagat gaaccagatttgaggtcaaatccttttcaagagggagggga1