;ID ATGP2I DNA ; ATH ; 5049 BP ;XX ;DE Internal region of ATGP2 gypsy-like LTR retrotransposon. ;XX ;AC AC006420 ;XX ;DT 12-APR-1999 (Rel. 3.2, Created) ;DT 12-APR-1999 (Rel. 3.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; gypsy superfamily; gag; pol; ATGP2LTR; ATGP2I. ;XX ;OS thale cress ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 5049) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATGP2I is an internal region of a gag-pol LTR-retrotransposon, ;CC ATGP2, that was active recently since there is only 1% divergency ;CC between its LTRs, ATGP2LTR. ATGP2 provirus is bordered by 5 bp-long ;CC target-site duplication. ATGP2I's ORF1 and ORF2 encode gag and ;CC pol-like polyproteins. ;XX ;DR Positions 94522 99570 Accession No AC006420 GenBank (rel. 109.0) ;XX ;SQ Sequence 5049 BP; 1467 A; 1002 C; 1473 G; 1107 T; 0 other; ATGP2I caagttggtatcagagcatgcttggttctaggactaggtgttgggttaaggggtatcaccactcgtcggc ttgagaatctcgcggtagttgttctttactcttttgctattttactaggagttatgtggattaactttgg aggtttcgcagatgggtaagagcagcaaaacgggaaagagtaagaaggataagggcattgtcgaggagac tttggttgaggaggaaacgatgatcaacgagaaaaccagagtcgggacgatgctcgatgggacagactcg gccggacctgaggccgggaagaagtccataaatgaggaagcaccggagagtagtggtgcaagggacaaca cggataaccggaacaatactccaacggcccaagaacagtgggatttgatgaagggagtgatggcgcaact agccacattgaccaaggccgttgtagcggatccagtggtccaaagagtggataaccaaaaggacgatgac tcggaagttgtggaagtgaatccacaaccgaatcatgggcgaaaaaggggagactatctgagtcttctcg aacatgtctcaaggctgggcacgagacacttcatgggcagtacagacccgattgtggccgatgagtggag gagtagactcaagaggaacttcaagtctacccgctgccctgaggattaccaaagggacattgcggtccac ttccttgaaggagacgcccataactggtggttaaccgtcgagaaacgcagaggggacgaggtccggtcct ttgcggatttcgaagacgagtttaacaagaagtactttccaccggaggcttgggataggcttgaatgtgc gtacctcgacctagttcaagggaaccgcacggtgcgtgaatatgatgaggaatttaaccgcctaaggcgt tatgtgggacgtgaacttggggaggaacaagctcaagtgcgccgatttatctgtggactaaggatagaga tccgcaaccattgtttggtccggacattcaactcggtttccgaattggttgaaagggcagcaatgattga ggaagggatcgaggaggagaggtacttgaaccgggagaaagcaccgatccggaacaatcaatccaccaaa cccgcaaataagaaaaggaaatttgacaaggtggataacaccaagtccgatgctaagaccggggaatgcg tgacctgtggtaagagccacagcggaacttgctgaaggccataggtgcatgtggccggtgtggaagcaag gaccatgcgatccaaagttgcccgagaatggaaccaggacagtccaaggttctcggtgaagagacaagga cttgtttctattgcggaaagactggacatctaaagcgagagtgccctaagttgactgcggagaagcaggc cggacaaagggacaatcgcgggggaaatggactgccgcctccccaaaagcggcaagccgtggcaccgcga gtttatgagttgtcggaggaagctaacgatgccggaaacttcagggcgatcactggtacgttctcacaac tccctattcattatttcaataactgcatttgcattgcatcatgcatatgggaaatgggaggtactcagca ttctaagggaatgtgtagggaccttgagagtaggtgacgtagtaacgcacactctatttgattctggggc tacacattgttttgttagtccggaattggttgaaacaggtgggttcaggaaagaaccaaacaccgattat ggaatggtacgagcggccggcggacaggcaatgtatccgaccggacttgttcggggcatctcggttgtag tgaacggtgtcaatatgcccgcggacctaatcattgttccactaaagaaacatgatgttatcttagggat ggactggttggggaagtacaaggctcacatagattgtcaccgaggccggatacaattcgagagggacgag ggtatgttaaaattccaaggaataagaacaacctcgagaagcttggtaatctcggcaatccaggctgaaa agatgctcgggaaaggttgtgaggcatatttagccacgatcacaaccaaggaagtgggggcgagtgcgta gttgaaagacattctgatcgtcaacgagttctcggacgtgtttgcggccgttagtggtgtagcaccggac cggttagacccgttcacgatagaactcgagcccgggacaacccccatatctaaagctccgtaccggatgg caccggcggaaatggcggagctaaagaaacagttggaggagttgttggataaaggattcatcaggccgag tagctcaccatggggtgcgccggttctatttgtgaaaaagaaagatggtagctttaggctatgcatcgac tatcggggattgaataaagttacggtgaaaaacaaatatcctttaccccggatagatgagttgatggatc aacatggaggtgcacagtggttttcaaaaatcgacttggcctcaggatatcaccaaattcccatagagcc aacggacgtgaggaaaacggctttccggacaaggtacggccactttgagtttgtggtcatgccattcgga ttgaccaatgcaccagcagccttcatgaaaatgatgaatggggtattccgggatttcttagacgagtttg ttatcatcttcattgacgacatccttgtttactcgaaatcttgggaagctcaccaagaacatctaagggc ggtgctggaacggctaagggaacatgagctatttgcgaagttaagtaaatgctcattttggcaaaggagc gttggttttcttggtcatgttatcttggaccaaggagtatcggttgatccggagaaaatacggtcgatga aggagtggccacgaccaaggaatgccaccgagattaggagttttctcggactagcagggtattaccgaag gttcgtaatgagttttgcgagcatggcccaacccttgactcgactgaccggaaaagacaccgcattcaac tggtcggatgagtgcgagaaaagcttcctggagttaaaggccatgttgactaatgcaccagtattggtct taccggaggaaggtgagccctatacggtttatacggacgcatccatagtgggactaggatgcgtactgat gcaaaaggggagtgttatcgcatacgcatcaaggcaattgtggaaacatgagaagaactaccctacgcat gatttggaaatggccgcggtagtatttgccttgaagatttggcgatcatacttgtatggtgctaaagttc aaatctatactgaccacaaaagcctaaagtacatattcatccagccggagttgaatctaaggcaaagaag gtggatggaacttgtggcggattacgacttggacatagcgtaccatccgggcaaggccaaccaagtcgcc gacgccctgagtaggaggcgctcggaagttgaggcggaacggagccaagtggacttggttaacatgatgg ggacattgcatgtgaatgccttatctaaagaagttgaatccttagggttgggagccgccgatcaggccga cctgcttagtaggatccggctggctcaggaacgggacgaggagataaaaggatgggcactaaacaacaaa accgagtaccaaacctcgaacaatggtacaatcgtggtgaacggtcgagtatgtgtgccgaacgataggg cattaaaggaggagatcctaagagaggcgcatcaatcgaagttctcaatccatcctgggtcgaacaagat gtaccgcgaccttaaaaggtactaccattgggtaggaatgaagaaagacgtggccagatgggtggccaag tgcccgacttgtcaactggtcaaggcggagcatcaagtaccaagtgggttgttacaaaacctacctatac cggaatggaagtgggaccacataacgatggacttcgtcactggactgccaacggggatcaagtccaaaca caatgcggtatgggttgtggtagagcgattgactaagtctgcgcacttcatggcgatctcggataaggat ggagcagaaatcattgccgagaagtatatagacgagatcgtgcggttacatgggattccggttagtatag tgtcagaccgagacacaaggttcacgtcaaatttttggaaggctttccaaaaggccttaggaactcgagt gaacctaagtactgcctaccacccacagacggacggacagtccgaacgaacgattcaaaccctcgaggac atgttgagggcatgcgtcttggattggggaggaaactgggagaaatatctaacgttagtagagtttgcat acaataatagttttcaagctagtattggtatgtctccctatgaggcgttgtatggccgagcttgtagaac accgttgtgttggacgcccgtgggcgaacgtcggttgtttggacctacgatcgtggatgaaaccacggag agaatgaagttcttaaaaatcaagttaaaggaagcccatgatcgacagaaaagctacgccaacaaacgtc gaaaggaattggaattccaagtaggagatttggtgtacttaaaggcgatgacctacaaaggggcaggacg attcacctcaaggaaaaagttaagcccaaggtatgttggcccgtacaaggtgatcgaacgagtaggggcg gtggcatacaaacttgaccttcctccaaaactaaatgcgtttcacaacgtcttccatgtgtcacaattac ggaagtgtttaagtgatcaagaagaaagtgtggaagatgtacctcccgggttaaaggagaacatgacggt ggaagcatggccagtacggatcatggactgaatgacgaaagggactcggggaaaatcaagggatttgtta aaagtcttgtggaattgtggaggccgtgaagaatacacttgggaaaccgagaataagatgaaggccaatt ttccggagtggttcaaggagatgggtaaagatcaacttgatgcggattcgaggacgaatccaattcaagg ggggagact1