;ID ATENSPM6 DNA ; ATH ; 8825 BP ;XX ;DE ATENSPM6, an autonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 06-MAR-2000 (Rel. 4.1, Created) ;DT 06-MAR-2000 (Rel. 4.1, Last updated, Version 1) ;XX ;KW autonomous DNA transposon; En/Spm superfamily; TIR; ;KW transposase; ATENSPM6. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 8825) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 2000) ;XX ;CC ATENSPM6 is an autonomous DNA transposon from En/Spm superfamily. ;CC Its individual copies are ~99% identical to the consensus ;CC sequence. They are bordered by 3 bp-long target site duplications. ;CC ATENSPM6 has perfect 18 bp TIRs. ;CC A putative transposase is encoded by six exons (258-2664; ;CC 2739-3087; 3152-3331; 3408-3507; 3588-3978; 4055-4374): ;CC MAGNYNYGGTGGFYRDWMYKRFDEVTGNLSAEYVAGVEQFMTFANSQPIVQSSRGKFHCP ;CC CSVCKNEKHIISGRRVSSHLFSHGFMPDYYVWYKHGEEMNMDIGTSYTNRTYFSENHEEV ;CC GNIVEDPYVDMVNDAFNFNVGYDDNYRHDDSYQNVEEPVRNHSNKFYDLLEGANNPLYDG ;CC CREGQSQLSLASRLMHNKAEYNMSEKLVDSVCEMFTDFLPEGNQATTSHYQTEKLMRNLG ;CC LPYHTIDVCQNNCMLFWKEDEKEDQCRFCGAKRWKPKDDRRRTKVPYSRMWYLPIGDRLK ;CC RMYQSHKTAAAMRWHAEHQSKEGEMNHPSDAAEWRYFQGLHPQFAEEPRNVYLGLCTDGF ;CC NPFGMSRNHSLWPVILTPYNLPPGMCMNTEYLFLTILNSGPNHPRASLDVFLQPLIEELK ;CC ELWSTGVDAYDVSLSQNFNLKAVLLWTISDFPAYSMLSGWTTHGKLSCPVCMESTKSFYL ;CC PNGRKTCWFDCHRRFLPHGHPSRRNRKDFLKGRDASSEYPPESLTGEQVYYERLASVNPP ;CC KTKDVGGNGHEKKMRGYGKEHNWHKESILWELSYWKDLNLRHNIDVMHTEKNFLDNIMNT ;CC LMRVKGKSKDNIMSRLDIEKFCSRPGLHIDSSGKAPFPAYTLTEEAKQSLLQCVKYDIRF ;CC PDGYSSDLASCVDLDNGKFSGMKSHDCHVFMERLLPFIFAELLDRNVHLALSGIGAFFRD ;CC LCSRTLQTSRVQILKQNIVLIICNLEKIFPPSFFDVMEHLPIHLPYEAELGGPVQYRWMY ;CC PFERFFKKLKGKAKNKRYAAGSIVESYINDEIAYFSEHYFADHIQTKSRLTRFNEGEVPV ;CC YHVPGVPNIFMHVGRPSGEMHVDWLSEKDYQSAHAYVLRNCDYFKPFESMFEDYLSAKYP ;CC CLPEKELYARRAEEYHLWVKEYVTYWNTTSPFPTWVQEIVQGPLNKVKTWPMYFTRGYLF ;CC HTQNHGAGRKTCNYGVCVKGENYADSSDEADFYGTLTDIIELEYEGIVNLRITLFKCKWY ;CC DPKIGRGTRRSHSGVVDILSTRKYNKYEPFILGSQADQVCYIPYPYTKKPKNIWLNVLKV ;CC NPRGNISGEYENNDPTLLQTENDDDVLLTTIEDLVLETPVANLNPIILDYDVGDAEPEDE ;CC FRCNLSSSDEDEVEDEDV ;CC Second protein, similar to PttA, Tnp1 and gene 1 proteins ;CC from petunia, snapdragon and maize Em/Spm-like transposons, ;CC is encoded by five exones (5425-5942; 6732-6894; 6950-7237; ;CC 7342-7569; 7651-8013): ;CC MPIAGRGGSRKRKTTPNVTQRAGAGGSRPANLPPQYNFTPAPAVQVPATEPAQQHGPSTS ;CC APHVRNYPPPLQLFQNSTTQPQHQAPPPLSEEVHYTPPPTAPPQQTPPQSRDSDAPANSH ;CC PSSQGNNFQEEVPGTLPELQEDSALALQSTLSVPNREQWCCVLSPIPKPKTEWFTRDRGS ;CC KLVRKITRIFTQKFNAPYYNWSCVPLDKRERLFLEFAKTHHWDPLITGTVQYYFNEIVKR ;CC RLKDMVSTARRTREQPPWIGETLWGTMCDYWDTEEAQKRSKTYSKARLSDRNGLGPHVHY ;CC SGPKSFQEIQDELEEKMGRPVPLGEVFIQTHTKSDGTYVDQKAEKIALAYEQNVREKLSE ;CC LEAAASAVSDGSSRPRDLTLDEYAAIFLESTEKDARGNPYGLGCLKETLGSANRQLPGDS ;CC TFKALEERLQEAQRQIEEQAAYNEKRDAEIAAREAETARVTAEQKDKLEHLSLVEKYLRQ ;CC TDPQFLDFIATHSSTSTERIPITPPSNDP ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 8825 BP; 2592 A; 1695 C; 1777 G; 2761 T; 0 other; ATENSPM6 cactacaagaaaacaggtaaacgacgactacaatcagcgacaacaaacgtagtcgtaacattatacgact atttggcgacggatttacgactcgcatgcgacaacacgaaaaattgtagttacatagtcgttgttttacg actatcgtatgcagtcggcaaagagtcggcaagtaacgactatttgacgattatattattgaagggataa tgttgtcgttgcttagtcgctaattaacgactattctaccgtctattttatttagtcgctaatttggcga ctacaggacgactagtcgtcttagtcgtcctgtagtcgtagaaacgtcgcaccgtagtcgtataaagtag atggaaaacgtgtttcgcattggtaagtaggtacacctaattatttagttgtagtcgtaaattagtcaca aaaattggcctatataataaacgttcacgcaactcttctttcaccaacaaatcaaaacaacaacaacatc aaagagaaaaaaaaaatattagttactttattgtataatggcgggaaactacaattatggcggtactggc ggtttctatcgagattggatgtacaagagatttgatgaagtgacggggaatttgtcagccgaatacgtcg caggagttgagcaattcatgacattcgctaatagtcagccaatagtacagagtagtcgaggtaaatttca ttgtccttgtagtgtatgcaagaatgaaaaacacatcatctcgggtagaagagttagtagtcatttgttt agtcatggatttatgcctgattattatgtttggtataagcatggagaagaaatgaatatggatataggaa cgagttacacgaataggacgtattttagtgagaatcatgaagaagtgggtaatattgtagaagatccata tgtggatatggtgaacgatgcatttaattttaacgtggggtatgatgataactatcgtcatgatgatagt tatcagaatgtggaagaaccggtccgtaaccattcaaataagttctacgacttgttagaaggtgcaaata atcctttgtacgatggttgtcgtgaagggcagtcgcaattatccttagcatctcgactcatgcacaacaa ggcggagtataatatgagtgaaaagttggtggactccgtttgcgaaatgtttacagattttttaccagaa ggaaaccaggcaaccacttcacattaccagaccgagaagttaatgcgcaatttaggacttccatatcata cgattgatgtttgtcagaacaattgtatgctattttggaaagaagacgaaaaagaagatcaatgtcgatt ttgtggcgcgaaaagatggaagcctaaggacgaccgtcgaagaaccaaagtaccatatagtcgtatgtgg tatctacctattggggaccggttgaagagaatgtatcagagccataagacagctgcggcaatgcgatggc atgctgagcaccaatcaaaggagggagaaatgaatcatccttcagatgcagcagagtggagatatttcca agggttacatccccagtttgccgaagaaccccgtaacgtttatctcgggttgtgtactgatgggttcaat ccatttggcatgtctcgtaatcattcgttgtggcctgtgatcctaactccttataatttaccccctggta tgtgcatgaatacagagtacttatttcttaccattctgaattctggtccaaatcatcctcgagctagtct tgatgtcttcctccaacctcttattgaggagttaaaagagttgtggtctactggagtcgatgcgtacgat gtttcattgagtcagaattttaatctaaaagcagtactactgtggacgattagcgactttccggcgtata gcatgttatcaggatggactactcatggtaaattgtcttgtcctgtttgcatggaaagtacaaagtcttt ttatctacccaatggacggaagacatgctggtttgattgtcaccgtagatttcttcctcatggtcatcca tcccgtaggaacagaaaagactttctgaaaggaagagatgcttctagcgaatatccacctgagtctttga caggggagcaagtttattacgagaggttggctagtgtaaatccaccaaaaacgaaggatgttggtgggaa cggtcatgaaaagaagatgcgaggctatgggaaggaacataattggcacaaggaaagcatcttgtgggag ttgtcttactggaaagacctcaatcttcgacataatattgatgtgatgcatacagagaagaattttcttg acaacatcatgaacactctcatgagagttaagggtaaatcaaaagataatatcatgtcaagattggatat tgagaaattttgttcacgcccaggcttacatattgatagtagtggcaaagctccatttccagcgtataca ttgacagaagaagccaaacagagtttattacaatgtgtgaaatatgatattagatttccagatggttatt cttcagatttggctagttgtgtagatctggataatggaaagttttcaggcatgaaaagtcatgattgtca tgtatttatggagcgactacttccatttatctttgctgaactgcttgaccggaatgtccaccttgcacta tcaggtacaatatatacttactatattttattccaacatttttttaatctaatcatttaacttgcacata tattttaggaattggagcatttttccgagatctatgttcgagaactttacagacaagtcgcgttcaaatt ctcaaacagaacatagttttaatcatctgtaacttggaaaagatctttccaccatcattttttgatgtta tggaacacttacctatccatctcccatacgaagctgaattgggtggcccagtccaatataggtggatgta cccattcgagaggtttttcaaaaagttgaaaggaaaagcaaagaacaaaagatatgctgcaggttcaatt gttgagtcatatatcaatgacgagattgcttatttttcagagcactactttgccgatcatattcaaacaa aatcaaggtaaatatatttaattatttaacgattagatattcttcgatattaattcacttacatggatca ggttaacaagattcaatgaaggtgaagttcctgtatatcatgtccctggagtacctaatatatttatgca cgtcggccgtccaagtggtgaaatgcatgtagattggctttcagagaaagactaccaaagcgcacatgca tatgttttaagaaattgtgactattttaaaccatttgagaggtatttttaatcactcgttgtttgtaaat tttcactaagatcactttgataaatttttcctcgtttgtaaatgtagtatgttcgaagattatctttctg ccaaatatccatgcttgcccgaaaaagaactctacgcgagaagagcggaagaatatcatctatgggttaa agaatatgtaagtctacatcaattttggttcattcgaaaggtgatcatttaatatatactaattgatatt gtttatctattatgtaggtaacatactggaacactacttctccatttcctacttgggttcaagagattgt gcaaggacctttgaacaaggttaaaacttggccaatgtatttcacaagaggatatttgtttcatacgcaa aatcacggcgctggacgaaagacatgtaactatggggtctgtgttaaaggtgaaaattacgctgattcat ctgatgaagcggatttctacggtaccttaactgatattatagaactcgagtatgagggtatcgtcaattt gaggatcacactttttaagtgtaagtggtatgacccaaagatcgggagaggcactcgacgaagccatagt ggcgttgtagacattctatctacgaggaaatacaataaatacgagccatttattcttggtacgtaattat tcttaagtccaaaatacgtttcttttttaattattaataatctatctttgatatatgtatacaggatctc aagcagatcaagtttgttatattccgtatccatatacgaagaaaccaaagaacatttggctcaatgttct aaaagtcaatccgaggggaaacatttctggagaatatgaaaacaatgatccaactcttttgcaaacagaa aatgatgatgatgttttgctcactacaattgaagatcttgttcttgaaactccggtagccaacttaaacc caataatccttgattacgatgtcggggatgctgaaccagaagacgaattccgatgtaatttatcgtcctc ggacgaagatgaagtagaagatgaagatgtataactgtgttaatatatgtataattatttgaataaatat tagaatgaattttgtttcataatatcattgaacttttttatgatatacaaatatttcttcacatttataa ttatatcaatttaaaagtgactattatgcgactaatgagcgacgaagataagttttattgggcttctaaa cgttgaaatccaaacccattaaaaccggcgacaaaacgacgactattatgcgacacctgtttgatatgtt gggctttaaaatttcgaggcccaaacccattagtataggcgtctatattgcgactaaataccgagacaag tttgttttgtgggcttcttaatttcggggcccaaacccattattatcggcgacaatattgcgactattgg ccgacagatgtttggtattttgggcttctaaatgttgaagcccaaacccagtaatattttatgacaaaga tgcgactatgttccgacaagttttgatttgttgggctttgaaattttgaaacccaaacccagtataattg gcgacaaaattacgactattcaacgatacttgtttgattagttgggcttcaaaatttcgaggcccaaacc caaatgaatatgcgacaattatgcgactattatgcgacttctattgtgttgaaaaccctaaatcgagtca tttctcttcgagccaaacacttagccatttcttcttcttcttcttcttcttcgtctcgaaaaccctaatc cccaattctctttctaagatcaatcctttctccttctagatcgatcttcttcttcttctgctaagatcga tcgatcttcttcgatctctcaccttaaacctattcgatccaacctcctcttcttcttcttcttcgtctcg aaaaccctaatccccaaaactctttctaagatcgatcctttctccttctagatcgatcttcttcttcttc tgctaagatcgatcgatcttcttcgatctctcaccttcaacctcttcgatctgcttcgtcttcttcttct tcttctcttcaatctcttcatttggctcactatcatgcctatcgccggtcgaggtggctcccggaagcgt aagacgacgccgaacgtcactcagagagccggcgccggcggatcaagacctgcaaatcttcctccccaat acaacttcactccggcgccggcggttcaagttcctgcgacggagccggctcaacaacatggaccttcaac gtctgcaccccacgtccgcaactatccaccgcctctgcaactcttccagaactcaacgactcaaccacaa catcaagctcctccgcctctatctgaagaggtccactacactccgccgccaacagcgccacctcagcaaa ctcctcctcagtcgcgagattcagacgctccagcaaacagccacccgtcgtctcaagggaacaacttcca agaggaagttcctgggacgttgccggagctacaagaagactcggcgttggctctgcaatcgacactctct gtgccaaacagggagcagtggtgttgtgtcttgtctccaattcccaaacctaaaaccgagtggtatgttc tcttcctctattttattctagtgttcttagcctgtgtagtgtaactcgtgttatggtctgtagaatggct tgttagggtttgtgtaacatagtagaatctgcctttgttggaattggatgtttgttagggtttgtgtaac atagtagaatctgcctttgttctaaactcgtgtgtgatcttgttaagttcttcactttgtctataatctt gttaggttatttattgtgttctgtggtgaatcatgaacataattgtggaacatttgttgattgttgaact tagcatgttttcggctttgacattgaggatctgtctttgttctatacttgtctataatcttgttaagttc tttattgtgttctgttgtgaatcatgaacataattgtggaacatttgttgattattgaacttagcatgtt ttcggctttgacattgaggatctgtctttgttctatacttgtctataatcttgttaagttctttattgtg ttctgttgtgaatcatgaacataattgtggaacatttgttgattgttgaacttagcatgttttcggcttt gacaatgaggatctgtctttgttctatacttgtctatacttgttctttactgtctatgatcttgttatgt tgactattgtgttctgtgtgtgatcttgtcggcttatacttgtctagaatcttgtagaatctgcctttgt tcaattatatagtctgctgtagttgtagtgttttggattttaaacatgtttactttctgtctgtgttgca tgtgtttggaggtttactcgcgacagaggatctaaattggttagaaagatcacacggatttttactcaaa agttcaatgctccctactataattggtcctgtgtgccattggataaaagagaaagattgtttttagagtt tgcggtaagcttcttgtatttctccaactttcattagactgtactatttaatctgtcatttgttcactaa cttcacactttttttgtagaaaactcaccactgggatcccttaataacagggacagtccaatactacttc aatgagatcgttaagaggcgcttgaaggacatggttagcaccgcaaggagaactcgagagcagcctccat ggattggagaaactctgtggggaaccatgtgcgactactgggacactgaagaggcacagaaaaggagtaa gacatattccaaagctcgtctctctgaccgtaacggtctcggtcctcacgtccactactctgggccaaag tctttccaagaaatccaagatgaattggtaagtgtttctgcaatcttcccatgtgttttagtgatgttcg tttaactgtgtgtgatgtttagtctgttgatagtaatgaagcttgtgatctgtgtttgcaggaagaaaaa atgggaagacctgtccctcttggtgaggtgttcatccagacacacactaagtcggatgggacttatgttg atcagaaggcagagaagattgctctggcgtatgagcagaatgtgagagagaagctgtctgaactagaggc ggctgcttctgctgtgtctgatggctcttcacgtcctcgggatctcacactagatgagtatgcagccata tttctcgaggtaagatgttctttgtctttttcagagtcttagagacatttaggatctgtcactaattatc ttcctctttatttcttgcagtccacagaaaaggatgcaagaggcaatccttatggacttggctgtcttaa agaaactctaggcagtgccaaccgccaactccccggagactcaacctttaaagccttagaagaacggctg caggaagctcagcggcaaattgaagaacaggctgcatataacgagaagcgagatgctgagattgctgccc gagaagccgagacagcccgagtcacagctgagcaaaaggacaagctcgagcacttgtccttagtcgagaa gtatctccgccaaaccgatccgcagttcttggacttcattgccacacactcttccacatccacagagcgt atcccaattactcccccatctaatgatccatagaatttaggtttccaaacactagttgtatctttcaata agttgtatgtttgaacaagataattttatgttttgaacttgattttcaatatataagcagtgttttcata ttgtatagcatatcaataacaaacaagaacaatcgatgaacaaacaagaacaaacaagaaacccatcacc tgatgaccaaatctttattcggaccaaactattagtcgcaaaaaagtagtaaataagtagcactatagtc gctgaatagtcgtcaattagtcacataactttacgacaatcataagactaaacaaattagtcataaaaga atcgtaaaacagacgtccaatagtcgtatatacttatacgactatgttatgacaaaaagtttcaaatcct tggtaaagtacttttaatcgtcaaagagtcgtcgaatagtcgtaaacatatttacgactattttacgaca actggaaacatacccagggtttagaatatttaatcgcaacatagtcgtaaagtcgtcgtacacaattaac gactacgaaacgactacatgttctcacacgctctgtacagtacaaataatcgtaggatagtcgtcaatta gtcgccgacatagtacgactacgtaacgacgatttttcactgtttagtcagttgtcgtattattgtcgtt gaccaacgactaataaacgactactgtttttagcgactatggattaatgactacagtcattagtcgcaaa ttagtcgtattagctttagttacgactactaaacgactgacttgtaggtcgtcaatcacctgttttcttg tagtg1