;ID ATENSPM1A DNA ; ATH ; 4279 BP ;XX ;DE ATENSPM1A, an autonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 05-NOV-2001 (Rel. 6.2, Created) ;DT 05-NOV-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW autonomous DNA transposon; En/Spm superfamily; 3-bp TIR; ;KW transposase; ATENSPM1A. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 4279) ;RA Kapitonov,V.V. and Jurka,J. ;RT ATENSPM1A, an autonomous DNA transposon - a consensus. ;RL Repbase Reports 1:(2) p. 39 (2001) ;XX ;CC ATENSPM1A is an autonomous DNA transposon from the En/Spm ;CC superfamily. Its individual copies are ~98% identical to the ;CC consensus sequence. Five copies of ATENSPM1A are present in the ;CC genome. They are bordered by 3 bp-long target site duplications. ;CC ATENSPM1A has 29-bp TIRs. There is a 84% identity ;CC between the ATENSPM1A and ATENSPM1 consensus sequences. ;CC ATENSPM1A encodes two proteins: ATENSPM1A1p (CDS: 1434-947 and ;CC 231-96) and ATENSPM1A2p (CDS: 1584-1855, 2073-2199, 2277-2567, ;CC 2664-2885 and 3402-3776). Function and classification of ;CC ATENSPM1A1p is unknown. ATENSPM1A2p is a transposase. ;CC ATENSPM1A1p: ;CC MKKKLDRREAVRSEKKTLPWRQKRSSRGCCWRRRVATAAGEEESRRLLEKKSRDGCWRRR ;CC DATEKKKKLDRTVEVGMERRSYIGEEDVTLEKKQIDSRLKLEKKSCGGCWRIRDAAEKKK ;CC RGGDVIRSKKKRGGGEENRSEKKRSRRRGKQIGEEENRRKKIRVKICDVSAWDLRRIISF ;CC LRNHRTSLANLRGSLPSQVLRRNCYARA ;CC ATENSPM1A2p: ;CC MPSSENTYARYRSQQRDPLHVNSPVSAGNISGVQGSRHPPSPPTPTTQPSVNHSDSQAER ;CC LNNLTLEELLDSPGRAGLTRLDPKRPPGTLWFDDDAAVAATVRSIFERDFKEPHANWSQT ;CC SKATIDRWYETFAQVYNWDRSINKRVRVEFEAKLKSRMTDQVSRWKGNWKEKGDEAKPKW ;CC IDPDVWKGLVLFWQDPKSEKRVTTAEMLGIMIRMAKASINTVQARPHTKLCEKTGEKTPD ;CC FLELLDETHRKADGSFIDGKSEEIYKQVTSRIEEEESHMGSGDNPESTGSGGLSVHAKNK ;CC IFTEVAPRKKGRIYGVGSLQFEASSAHSGPTLPSDDPVILSAKLAAAEACIQNQAEKINS ;CC FDILFDYLAEKDPALAAILRRGSSTQTRPVSANEPPVATAPEQQANEETAAAAALANLAT ;CC GSSPSSVF ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 4279 BP; 1158 A; 903 C; 924 G; 1563 T; 0 other; ATENSPM1A cactacaagaaaacagtcaatttgcgaggaagggttgcgagggaaggcattcctcgcagtttttgcgagg gtattgcgagaaaggtgctacgtaccgcacgcgcgtagcaattccgtcgcaaaacttgcgagggaagact tcctcgcaaatttgcgagggaagtacgatggtttcgcaagaaagatattatccgtcgcaaatcccaagca gatacgtcgcaaatctttaccctaaaccctaaaatacataaaagtgttttgcaatctttgattctcattt ataaatatgaatctaagtgaccatataatcattcaagttgattatatggtttgaacaaaaaaatattgta ttggtttcaatattaacatttcattttgaaaatgttaaacattcatgattcatacttaatgaaaaccata agatcatcattgatgtatttggggaaaaaacacattcgaattatatgatgataaaataggttcaaatgta gataattaacgttctaatgattcaaaaaaatgaatccaaatgattttgagtagtgattgttgtatttttc gaaattgattatacattgcgaggaaattgcgaggtgtttgctagtacgcgtagcacttccctcgcaatat ttacactaaaccctaaaatatttagaatttttagtcatgttcttattttgctgagggtcttactagaaat aggagagactgaatcaaatataattattgaatcagatatgatttaattggttaaaactctgcgagggatt tgctaggcgctctcgcagttccctcgcaatgtaagctgcattttgattggtttaaaagacggttcctcgc aatttcctagcaaggtttgcgagtgatttgcgaggaaatatattcttatatatactcgataacctagttt gagcggagctcaaacctgccgcatcaaaccctaaacctaattttttttcttcgattctcttcttctccga tctgttttcctcgtcgccggcttctcttcttctccgatctattttcttcgccgccgcctctcttcttctt cgatctgattacgtcgccgcctctcttcttcttctccgccgcgtctcttattctccagcagccgccgcaa ctcttcttctccagcttcagccgcgagtcgatctgtttcttctccaaggtaacgtcttcttctccgatat aacttcttctttccattccaacttccaccgtccgatctaacttcttcttcttctccgtcgcgtctcgtct tctccagcagccgtcgcgactcttcttctccagcagccgtcgcgactcttcttctccagcagccgtcgcg actcttcttctccagcagcagccgcgactcgatctcttttgcctccaaggtaacgtcttcttctccgatc taactgcttctctccgatctaacttcttcttcatctccgatctgacattgttttccagatctaatctgtt ctagtttacggatctaaactctgtcaatcatttgttctgcttctgcttttgcttctgcttctctccgatc taacttcttcttcatcgcttctgggttttgtttgttttgcaagatgccgtcgtcggagaatacttatgca cgatataggtcacagcagcgagacccgttgcatgtcaattctcctgtcagtgctgggaatatttcagggg ttcaaggttcacgccatccaccatcgcctccaacgccaaccactcagccttctgtcaatcattctgattc tcaagctgagcgtctcaacaatctcacactggaggagcttcttgatagtcctggtcgtgctggcttgaca aggctagacccaaagcgtcctccgggaactctctggtaaggttaaattcattgtcctagaacagcttagg ttgtagtgccttagaactttgtagtgccttagagcgtaatggaattaggttgtagtgccttaggttgtag tgccttagaagtttcaacaaatagaacagcttggttgtacttagcattgtgatgtcttagaagtttaaag acatagaaatccttatgtgtgggctggttggtcttcttgtaggtttgacgatgacgctgcagttgcagca acagtccgcagcatctttgaaagagatttcaaagaacctcatgccaattggtcacaaacatcaaaggcta caatcgatcgatggtatgaaacgtttgcggtaagttctgtgctcttttgatgtttatgcttgttttgtgt atggtttcatttctgatgttagcttctcttttgtagcaagtatataactgggaccgttcaattaacaaaa gagtaagggttgagtttgaagcaaagctaaagtctaggatgactgatcaagtgtcacggtggaagggaaa ttggaaggagaagggtgatgaagccaagccaaaatggattgatcctgatgtgtggaaaggtctagtactg ttttggcaagatccaaagtcagaaaaaagagtaacaacagcagaaatgctaggtatcatgatccggatgg caaaggcatctataaacaccgttcaggccagacctcatacaaagctcgtgcaagaaaacgggtaagataa gtattcttctctccttaccattacttaatctagaattacatactgacatcttgtttatctctttgtgttt cagtgtgagaagactggagaaaaaactcctgatttccttgagctgctagatgagacacacagaaaagcgg atggaagcttcatcgatgggaagtcagaggagatctacaagcaagtgacatctaggattgaagaggaaga gtctcatatgggttcaggggacaatccggagagcactggatcaggtggactttctgttcatgccaagaac aagatatttactgaggtaaattttatgtgctctttctgttgtctgaaatcttatactttgtgtagtgttg tgtttgaattgcttttgtgtctgaaatcttattgtgttgtctgaaatcttattgtgttgtctgaaatctt attgacagcttattgtgttgtctgaaatcttgacagcttattcattatactttgtgtagtgttgtgtttg aattgctttctattgcaagtgtggttgtgttgtgtacttgataatcactgttagcgttgtctagttgtgt ctgaaatcttattgtgttgtctgaaatcttattgacaacttattgtgttgtctgaaatcttgacagctta ttcattatactttgtgtagtgttgtgtttgaattgctttctattgcaagtgtggttgtgttgtgtacttg atagtcactgttagcgttgtctagttgtgtttgaattcttttgtcttgtgttgaacttgttttctcactt gttttctgttgtgtccttgtgagtttttgtgacctttgcaggttgctccgagaaagaaaggaaggattta tggtgttggatctctgcagtttgaagcatcctcagcccatagtggtccaacacttcctagtgatgatccg gttatactttctgcgaagctggctgccgctgaagcttgcattcaaaatcaggctgagaagatcaacagct tcgatatcctctttgactatcttgctgagaaagatccagctttagctgccattcttcgacgaggttcctc gacacagacaagaccggttagcgcaaatgaaccacctgtagctacagctccggaacagcaagccaatgag gagacagctgctgctgctgccctagctaaccttgcaacaggatcctctccatcatcagtattttgagaac attgtctttctcttttttccttgtaatctttttagaacatggtttcaaacattggcattgtagtatacat tttagataatgataatttcagcttcttcttcttcttgtgtctttatttaagaagcaaaaataatctctaa tcaaatcctaattaactaggtaattagagtctaattaaccaggtaattagagtctaattaaccactaatc aagccttaatatatcaggaaatcagttgcttgaaaatacttgctaggcagaaagaaaagaatcgcaaatc cctcgcaacagttgcgagggaagtactagaactgtagttgcgtgtgttttgcgaggaaaacagttcctcg caaaatttgcgagggaattgcgactttttaccatttgcgagaagcgatttgcgaggaacttgatttcctc gcaagtccctcgcgtatggctgtttgcgagggattagcgagtaattcttccctcgcaaaacgactgtttt cttgtagtg1