;ID ATENSPM10 DNA ; ATH ; 8272 BP ;XX ;DE ATENSPM10, an ancient autonomous DNA transposon - a consensus. ;XX ;AC . ;XX ;DT 18-MAY-2001 (Rel. 6.1, Created) ;DT 18-MAY-2001 (Rel. 6.1, Last updated, Version 1) ;XX ;KW autonomous DNA transposon; En/Spm superfamily; TIR; ;KW transposase; ATENSPM10. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 8272) ;RA Kapitonov,V.V. ;RL Direct submission (May 2001) ;XX ;CC ATENSPM10 is an autonomous DNA transposon from En/Spm superfamily. ;CC It was transpositionally active in the genome several million years ;CC ago. There are ~20 copies of this transposon present in the genome. ;CC They are ~95% identical to the consensus sequence. ;CC ATENSPM10 elements have generated 3-bp target site duplications ;CC upon their insertion in the genome. ;CC ATENSPM10 has 28-bp TIRs. The consensus sequence has been ;CC reconstructed based on multiple alignment of 12 copies. These copies ;CC belong to different minor subfamilies. ;CC ATENSPM10 encodes ATENSPM10p, a tranposase-like 1771-aa ;CC proteins. The protein is encoded by putative 14 exons, predicted ;CC by FGENESH (http://www.softberry.com/nucleo.html): ;CC 1 + 1 CDSf 1201 - 2631 132.14 1201 - 2631 1431 ;CC 1 + 2 CDSi 2914 - 3539 65.37 2914 - 3537 624 ;CC 1 + 3 CDSi 3618 - 3905 36.61 3619 - 3903 285 ;CC 1 + 4 CDSi 4027 - 4096 -6.14 4028 - 4096 69 ;CC 1 + 5 CDSi 4165 - 4759 52.03 4165 - 4758 594 ;CC 1 + 6 CDSi 4908 - 4951 11.66 4910 - 4951 42 ;CC 1 + 7 CDSi 4999 - 5568 93.49 4999 - 5568 570 ;CC 1 + 8 CDSi 5639 - 5845 24.76 5639 - 5845 207 ;CC 1 + 9 CDSi 5912 - 6001 11.13 5912 - 6001 90 ;CC 1 + 10 CDSi 6081 - 6188 9.19 6081 - 6188 108 ;CC 1 + 11 CDSi 6259 - 6513 38.17 6259 - 6513 255 ;CC 1 + 12 CDSi 6594 - 6935 39.42 6594 - 6935 342 ;CC 1 + 13 CDSi 7024 - 7365 17.15 7024 - 7365 342 ;CC 1 + 14 CDSl 7479 - 7766 28.00 7479 - 7766 288 ;CC 1 + PolA 8123 1.05 ;CC ;CC ATENSPM10p: ;CC MDKTWVWLPRNSIEYEKGATTFVYASSRRLGDPSEMFCPCMDCRNLCHQPIDTVLEHLVI ;CC KGMDHKYKRNGCWSKHGEIRADKLEAEPSSEFGAYELIRTAYFDGEDHSDSQNQNEDDSK ;CC EPATKEESDFREKLKDAETPLYYGCPKYTKVSAIMGLYRIKVKSGMSENYFDQLLSLVHD ;CC ILPGENVLPTSTNEIKKFLKMFGFGYDIIHACPNDCILYRKEYELRDTCPRCSASRWERD ;CC KHTGEEKKGIPAKVLRYFPIKDRFKRMFRSKKMAEDLRWHFSNASDDGTMRHPVDSLAWA ;CC QVNDKWPQFAAEPRNLRLGLSTDGMNPFSIQNTKYSTWPVLLVNYNMAPTMCMKAENIML ;CC TLLIPGPTAPSNNIDVYLAPLIDDLKDLWSDGIQVYDSFLKESFTLRAMLLWSISDYPAL ;CC GTLAGCKVKGKQACNVCGKDTPFRWLKFSRKHVYLSNRKRLRPGHPYRRRRGWFDNTDLP ;CC VRHNIDVMHVEKNVSDAIVSTLMQSAKSKDGLNARKDLEDMGIRSNLHTQLRGKRTYLPP ;CC AAFWLSKDEKKRFCKRLARFRGPDGYCANISNCVSVDPPVIGGLKSHDHHVLLQNLLPVA ;CC LRGLLPKGPRVAISRLCHYFNRLCQRVIDPEKLISLESELVETMCQLERYFPPSLFDIMF ;CC HLPIHLAREARLGGPVHFRWMYPFERYMKTLKAYVKNFARPEACMAEGYLAGECMAFCLK ;CC FLQNSLSVPEVVNRNEDVDSNSLVLEGRPLQKATQVTLTSKERDIAHRYVLMNMAVMDPY ;CC VKCMKNETFLWKTHAEKFSQWVKEKIPTNSKENSTQPRWLAFGPRHIAQSYKGFVINGHR ;CC FHTDDMKRKTQNSGVTYEAFSMCRSSAKDTRQQADIVSYFGVIKEIIMLDYHMFQVPIFK ;CC CHLANKGNGVKEEDGFTLVNLHLNQTAFLQDPYILAAQAKHVFYSREDDSSPWYVVMKAP ;CC PRGYHELETEEEFVAASVSIQENDDLGNESSDDESFCVRNDCEGKECLLYNRRTNLAAKH ;CC RKSKKTVAEKAAIAHHQQEEETEQVADVLGSDLAAEEEEEQVAAVLGSDLAAEEEEEQVA ;CC DEEVQPAEPAEEDHQPPEEEGIEEEMAAEEAGTEEEGTEILSTESTQSHQSATKKRKTRG ;CC PTRMRKIAKQPDEKLEVEFTSLGEHVGSGSVTLSSFLGPLVREHVPVLLHDWRHLPDETR ;CC DTLWEEIQGRFNLKEDWQKDAVFKQMGCVWRSSKSKLTTKVRAVKSKTDLLSLKPSNIQS ;CC VTAWNAWVKNRKTTAFKEISDKYRMLRKAQIPHTTSRKGMIRLAHEMKKKSSNPKLVTRS ;CC KVWIAGHTHSDGRPVNPEFAETIEKIKSIDSEMDSSSFTDLKEDAVSQVLGKDKPGRLRG ;CC MGRGVTATKLAFMLARDSHVEKLEATQADLLTKLEDLQNVVSGLAAKKEHVEEVSKSEAS ;CC NVSAGVRCQLLDWCSDDDVVVGEGEFCSAEQMYKIGRIPLGRNAAAVIVKSVSDATTSLW ;CC RPTPSVFTLGEALGNKIAWPFDKIILDSDVSSPSENQTAGSSAKDSSAVKIIIIDWNMAD ;CC SVVGEGRLCSTDRQELVNNMPLGPSAAIVKVEKVFNKAAYLWRPSPGKFVMGDVLNENIA ;CC WPLHSIQYVNSSPPLYETASAEKRPSPPLADKRPASSLSHSTASTSKSAKKKCIMLDYKN ;CC GRERVAEGRVCTSNPSDTVHHMPLGPNASKVCVEVSKIGDAAVWRPNSEIQTIADAVGSI ;CC VAWPTDKIMFV ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 8272 BP; 2501 A; 1340 C; 1830 G; 2601 T; 0 other; ATENSPM10 cactacaagaatattgagcatttatagcattatattgtagcagttaaccgtgttctgctataatttacta accagctaaaatgttatagcgtttggtaatttcaaaacgctatactatcttaccccgggaaataaaatga cgcgggtcaatatttttagattaggggttattattcgatagcactaatttacaaaaaacgctacctaata tagtagcgcggaatgaaatttttttgctcgctggagaataaaatatttggtgacttttaaccccgaaatt tttttctaaggcaaaaaaacattgttcgtgttctcactgttcttcatctcactgttcttcatctctttca attctctctttcaattctctctgttcgtgttcgtgttcgtgttcttcagctgtctgtctctctcccgtcc ctgttcgtgttcttgctcaacgcctcaatctctcttggtactcttcagcttctcagtcacagatctggtt ctaattcgagaaggttatgtttcttttgtaatcgatttagggtttgcattgtgaaatttgtcttgtttga gtttcgatttggggttttaatcacatttagggtttgattttcaggtttctcagatttaggggtttcgatt tggggctttcgctatccgcgtttctcgaagatttcagtggcttctctttgacaggtatgttatttagatc gatttctgtggttcttagatcgattttgagtttcatatagctttgaacttgactattctcatgtatcgaa ttgagtttcatatagctttgatagtgagcattcatttgtatcgaattgagtttcaaatagctttgatagc ttgtattcacttgtatcgattagaacttgactatttacagtgactattgacttgtatcgattagaacttg actatttctgtgactattcacttgtatccaattgaacttgactatttatgtgattcacttgtatcgaatt gagtttatttctgtggttcttagtttacgtgtagctttgagtttatgtggttcttgtattcaatatagct ttgatagtattgaatttttgtttttgaaatttctctttgtgtctttgttcttgtatctctgttaactaat atatatatatatatatatatatatatatatatataaatattatcatatatatggggttggagcttgttgg tgttttaaaaatggataagacttgggtatggctgccaaggaatagcattgagtacgagaaaggagcaaca acttttgtttacgcatcatcgagacgtttgggagatccttctgaaatgttttgtccatgtatggattgcc ggaatctgtgtcatcaaccaattgatactgttttggagcatctggttattaagggaatggatcataaata caagagaaatggatgttggagtaagcatggggagatacgggctgataagttagaagctgagcctagtagt gaatttggagcttatgagctgataagaacagcttattttgatggagaagaccattctgattctcagaatc agaatgaagatgatagtaaggagccagcaacaaaagaagaatctgactttagagagaagttgaaggatgc tgaaactccattatattatgggtgtcccaagtacacaaaggtgtctgcaattatggggctttaccgcatt aaagtaaagagtgggatgtcagagaattactttgatcaacttttgagtttagtgcacgacatcttaccag gagagaatgtgcttccaacttcaacaaatgagatcaaaaaattcttgaagatgtttggttttgggtatga tatcattcacgcttgtccgaatgattgcatcttatacagaaaggagtatgagctgagggatacttgtcct agatgcagtgcttccagatgggaaagggataaacacactggtgaagagaagaaggggattccagctaagg tacttcggtattttcccatcaaagatagattcaagcgaatgtttagatccaagaaaatggctgaggactt acggtggcattttagcaatgctagtgatgatggtacaatgcgacatccagtagactctttagcttgggct caagtgaatgataaatggccacagtttgctgctgaaccaagaaaccttagactgggactttcaactgatg ggatgaatccgttctctattcagaacactaagtatagtacctggccagttttgctagttaactacaacat ggctccaaccatgtgtatgaaggcagaaaatatcatgttaactcttttgatacctggacctacagcaccc agcaataacatagatgtctatctagccccattgatagatgacttaaaggatttgtggagtgatggtattc aagtttatgactcattcttaaaggaaagtttcactcttagagctatgttgttgtggagtatcagtgacta tccagccttagggacattggctggttgtaaggtgaaaggaaaacaagcttgtaatgtctgtgggaaagat acaccttttaggtggttgaagttcagtagaaaacatgtgtatttaagcaatagaaaacgactcagaccag ggcatccttacaggcgtagaagaggctggtttgacaacactgtagaagaagggacaactagtagaattca aactggagaagaaatatttgaaacattaaaggatttcaaaaatgattttgggagacccttggagagaaac agcaaaagaaagagatcagatttgtgtgaagatgatgaatatggtgaagacacacatcaatggagatgga agaagcgatcaattctttttgaattaccttattggaagtaaatacttcaccttttgaattttatcttgaa tttaatcttgattggctctaactacttattgtttgtattgtaggacctccctgtccgtcacaacattgac gtgatgcatgtggagaagaatgtgtctgacgccattgtgtctacgttgatgcaatctgccaaatcaaagg atggcttgaatgcacgcaaagacttggaagatatgggaattcgtagtaacttgcacactcagttaagagg gaagaggacatacttacctcctgcggcattttggttatctaaggatgagaaaaagagattctgcaaaagg ctggctaggtttagagggccggatggatattgtgccaatatctccaactgtgtttctgtggatccaccag tcattggtggtttgaagtctcatgatcatcatgtgctccttcagaacttgttacctgttgctttgagagg attgctgccaaaaggacctagagtcgctataagtagattatgccactacttcaacaggctgtgtcagcgg gttattgaccctgagaagctaatctcattggagtctgaattagttgagactatgtgccagctggagaggt actttcctccatctctgtttgacatcatgtttcatctgccaattcatttggctagagaggctcgcttagg tggaccagtccactttagatggatgtatccctttgaaaggtattgtctataactttgtctatatagttaa ttacttatataaaatttggatattgatctaatcttattaacttgcaggtacatgaaaactctaaaggctt atgtgaagaattttgcaaggcctgaagcttgtatggctgagggatatttagctggagaatgtatggcttt ttgcttgaagtttctacaaaactcattatcagttccagaagtcgttaaccgcaatgaagatgttgatagt aattcacttgttcttgaaggcagaccactgcagaaagctacacaagtaactcttacgagtaaagagcgag acatagctcatagatatgttctaatgaacatggccgttatggatccatatgttaagtaagtgattctgca ttattttctgtcattattatttgactgtcattaacttgtattctaaactattttgtaaaactggtcacaa cttgcatttagaagaactccaagctactgatgccagatgtatgaaaaatgaaacgtttttatggaagaca catgcagaaaagttctcacagtgggtaaaggagaaggtgaacatttagttgatttttcattcattgaagt actctaattttgattttttgttctctgctaatagatacctacaaactcaaaggagaattcaacccaaccg agatggttggcctttggaccaaggcatattgctcaatcatacaaggggtttgtcattaatggacacagat ttcatacagacgacatgaagaggaaaactcaaaacagtggggttacatatgaagcattttcaatgtgtag atcaagtgccaaggatactagacagcaggctgatatagtgtcatactttggagtgataaaggagatcatc atgttggactatcacatgttccaagttcctatattcaagtgtcatttggctaacaaagggaatggagtca aagaagaagacggattcactcttgtcaatctccatttaaaccaaactgcttttcttcaggatccatacat tctggctgcccaagcaaaacatgtcttctactctagagaagacgattcttcaccttggtatgtagtaatg aaggcgccaccaagaggatatcatgagttagaaacagaagaggagtttgttgcagcatcagtatcaattc aggagaatgacgatttagggaatgaatcatctgatgatgagagtttctgtgttaggaatgactgtgaagg tgtcttagtaatggattaataggacagtaaggagtctttgcgtgttggttaatgggagtttctgtgttgg ttaatggagtctttgtgtgttgggtaatgggatgagtttttgtgtttgatagtattgatcagtttggtgt gtttcaggtaaagaatgtctactttacaacaggagaaccaacctcgccgcagtaagcgtatgcaagggat agagttgagttctactgttggattaaagaaacatagaaaaagcaagaaaactgtggcagagaaagcagcc atagcccatcatcaacaggaggaagagactgaacaagtagctgatgttcttggttcagacttggctgcag aagaggaagaagaacaagtagctgctgttcttggttcagacttggctgcagaagaggaagaagaacaagt agctgatgaagaagtccaaccagctgaaccagctgaagaagatcaccaaccacctgaagaagaaggaatt gaagaagaaatggctgcagaggaagctggaactgaagaagagggaactgagattctgtccactgaatcaa ctcaaagccaccaatccgcaaccaagaaaaggaagacacggggaccaactaggatgcgtaaaatagcaaa gcaacctgacgagaagctagaagttgaatttacttctctgggtgaacatgtaggttcaggatcagtcaca ctttcatctttccttggtcctcttgtgagagagcatgtacctgttttgcttcatgactggaggcacttac ctgatgagactagggacacactctgggaagagattcaggtatatcagtctcatttgctgagtttaatcat tgcatgattgtgtttaactatgtgttttcaatgtgtaggggaggttcaatttgaaagaagattggcaaaa ggatgctgtttttaagcagatgggttgtgtgtggaggtcttctaagtcgaagctcacaacgaaagtgcgt gcagtgaagagcaagacggatttgctttcgctaaaaccaagtaacatacaatctgtgacggcttggaatg cttgggtgaagaacaggaagaccactgccttcaaggttgtgtatttttgtaaattgaaatttttagaaga tgatttgttttaatggaagttgcttttgcaggaaataagtgacaagtacaggatgttgaggaaggcacag attccacacaccaccagccgcaaaggaatgattcgcctagcccatgagatggtatagtatatgtctactc tgtaatcaattaagcttgtgtaaattggttaccatcaactaatcactatctgttttgtagaaaaaaaaga gttccaaccctaaattggtgacaagaagcaaggtttggatagcaggtcatacacactcagatgggagacc tgtcaaccctgaatttgcagagacgattgtaagacaatcattcacttgctttctttttttgttttgctag tacttattgtcattacattctgtttcaggaaaaaatcaaatctattgatagtgaaatggactcatcatca ttcaccgatcttaaagaagatgctgtgagtcaagtattaggtaaagacaagcctggaagacttagaggta tgggcagaggagtcactgcaactaagttagcattcatgttagctagagactcacatgtggagaagcttga agctacacaagctgatttgctgacaaagcttgaggacttgcaaaatgtagttagtggcttagctgccaaa aaggtaaattatctaactgaatacacttgtgctattaagcaaaattgaatgttatatgttactaattcca ttgtttttgtcaggaacatgttgaagaggtttctaagtctgaggctagtaatgttagtgcaggagttcga tgtcagctacttgattggtgttcagatgatgatgttgttgtaggtgaaggagaattctgctctgctgaac aaatgtacaagattggtcggattccacttggacgtaatgctgcggctgttattgtgaagtcagtgtcaga cgccacaacttctttgtggaggcctacaccatcagttttcacacttggtgaagctttagggaacaagatt gcttggcctttcgataagatcattctagacagtgatgtatcttccccttctgagaatcagactgcaggat cttcggtaatgtctttttcccatcacttgtcaattatctagctgaacctaaacactgactctagtcactt attatttatgcatcatgccttaggctaaagattcatcagccgttaaaatcatcataattgattggaatat ggctgattctgtggttggtgagggtcgattgtgttcaacagaccgacaagaacttgtgaacaatatgcct cttggtccttctgctgcaattgttaaggttgagaaggtgtttaacaaagccgcatatttgtggagaccaa gtccaggaaagtttgtgatgggagatgtactaaatgagaacattgcatggccacttcatagtatacaata tgtgaattcatctcctccactgtatgaaacagcatcagcagaaaaaagaccatcacctccattggcagat aaaagaccagcatcagtaaatttctgcactttaacttacagcctataaaatcacttaagtattatttctg cttgaatgcttggtattatttctgcctgaatgcttggtattatttttgattcttgtagagcttaagccac agtactgctagcaccagcaaatctgccaagaagaaatgcatcatgttagattacaagaacgggagagaaa gagtagcagaaggaagagtatgtacctctaacccttcagacacagtccatcatatgcccctaggtccaaa tgcgagcaaggtatgtgtagaagtttcaaagattggagatgctgctgtgtggagaccaaactctgaaatt caaaccattgccgatgcagtaggtagtattgtggcttggcctactgataaaatcatgtttgtgtaaacat tatgtggttttttttgttaagtactgataaaatcatgtttggctttgacattgaaatgtaatttgggatc ttgaattttatataatatgaatttctttctgaattttgaatttatgatatctaaataatatgaatttctt tctgaatttgggattaaaaaataatttatgaactggaattaattggagaaatattgcataattaaaaatg ccataatatataaatattgcaattaactaaatgctattgtctaattatatgtagcaaattaaatatgcta tgtataatagttatttatatcagaaactaatcgctattaaataattaaagattgcagcagataaagcgct gtaataaatgaaataatgatagcagaacaaaaaagcgctacaatatgtctccgacctattatgacggacg atgatagagcgcttctaataacgctatagtataattaaatagcgtttttcgggcgctacaaatgctccat attcttgtagtg1