;ID ATDNA1T9A DNA ; ATH ; 3552 BP ;XX ;DE Nonautonomous DNA transposon ATDNA1T9A - a consensus sequence. ;XX ;AC . ;XX ;DT 15-SEP-2000 (Rel. 5.8, Created) ;DT 15-SEP-2000 (Rel. 5.8, Last updated, Version 1) ;XX ;KW nonautonomous DNA transposon; host gene; VANDAL; ATDNA1T9A. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Charophyta/Embryophyta group; ;OC Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; ;OC Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; ;OC Arabidopsis. ;XX ;RN [1] (bases 1 to 3552) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (September, 2000) ;XX ;CC ATDNA1T9A is a nonautonomous DNA transposon. There are several ;CC copies of this element in the genome, they are 99% identical to ;CC the consensus sequence. ATDNA1T9A is flanked by 9-bp target site ;CC duplications generated upon its integration in the genome. ;CC ATDNA1T9A shares common ~100-bp termini with LIMPET, ATDNAI27T9A, ;CC VANDAL4 and VANDAL5 transposons (~65% identity). ;CC An autonomous transposon involved in a proliferation of ATDNA1T9A ;CC is related to the superfamily of VANDAL-like megatransposons. ;CC ATDNA1T9A harbors the host phosphate/phosphoenolpyruvate ;CC translocator (PPT) gene (GenBank AF209210). The ATDNA1T9A second ;CC strand (position 2743-3274) is 93% identical with truncated ;CC PPT exon 1, intron 3 and exon 5, and complete exon 4 and intron 4. ;CC The genome contains a few copies of the ATDNA1T9B transposon, ;CC which is free of the PPT gene and is an ancestor of ATDNA1T9A. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 3552 BP; 1226 A; 558 C; 642 G; 1125 T; 1 other; ATDNA1T9A gggaatgtagcataatgagacacttttaaagaaagtttttacgtttgaggcactttataaggagagggca ctttttgtgttgtttgtgtgttttttggacttttatacccctgggatgaaagaaacgctaaccaaaagtc agttatcaaattgtctttaaccgaacacttgaaaacaaaccaattaagttatatggggtttaatatcgat cgttggattaaaatctactataattaagatgaagttatcagatctaagaatagtcgctctctacaaagag caatttctttctctctccaacacaacaatggcgagagccaagaaggtgttaattctcactatactaatca aattctcctattaacgttctcaatttttcattttctttttcccttgcctttgcattatcgagatctaatg agcacggagtcgttgatgacgacaaattgatgacgagtttgttcttctaatggccttctctctcttcctc gtcggtcctagttgctcacctgaagtaagattcacgtcagttatggtcagatcttagatccagtgcagat tcacgatgagtcatcgatggataacgaacgcaaatccaggaggaaatcggtgaataaacgatataaagcg gcgatnatctgccgtaaaatgcttctccggtgacacaccgaaggtgacggaaatttcgaaaaagtggtga ttacagtctaaggaaagtggatatgtgaatgaaactaaaaattggacttgcgcaagatatcaatatttga agaagcagtttcttaagcatctaactagtaagcttgggagatgggaaacagtggctttggaattcgtagg aaggtacaagacatagaatgtgattaagaaggcgaaagagattggtggaagaaaatcaacgagagtgatt ctatcttggtaaattgatgctttgttggacatctaaactaagagaattagactttgtagatgacagtcaa tttcatagtgttatatatattatacttgtaagagattgttcttgggttttggagttttgttgttttagct ttgtcgttcctatgcaagaaaatgatggatgagactcacaaatattgctttgaaagaggaagtgatgatc aacaattctgatattactgttactccaactctcttgggattaaccagttctttatctaggtgtgtagcct aaactccttttatatatcaaatgctaaactctgtgttcataatttcacattagtgttataaacttcacat tagttacatggctgccaatatcattaccacacaactctgttttgtttttttactctacatgtctcttctc attaaaaattagctttaaaagataaggtaatgattgtttaattagcttatcttgttttaaaaaataagag taatggtctacttaaatctgcttatgttaacagaatattgtatcattttttcatgtgttttggtaacttt cttttgttttctatgaacaaatgcttatggtcaaatggacaagtgtttatggttgaatcttaatggataa tctgaaagtgtttatatctcttaatccattgtggtgatgatggtgtccaaagcctgcaacaagtcttgat gattcaaataaatgtaaaactagatgaacccctaatccttatccactaaatttgaaaccgtaaaacaaaa ctctaaaccatatagtatatcataaccataaaaaaatgataattttacagagcgataaaacacattgaca gtagatcaaagacataggtgtccattaatgattgtccaagcggtctagtccatatttaatgattcaccag gtagtatatcatttcaatacacaagtttatacatgaatgataattgccaattcaaaatacatcgtacatc gttcatttttctttgaccatttattcatttgtgtatggacacttccatcattatatagtattagtcattc tttcttaagaagtatctaaatgaaaattacatggcttttctaaagattttaaaactcgcaaaaatggagt gacaaataaacagatttgaaaaatggtttcatgtacctatataaaaccaataatcaataagttggtttct attaaatttttataatttgcaaaacatggagtgataaatgaataaatttgaaaaatggttccatatcttc gacgtatatacgaccaataatcaacaatttggccagatcttcaaaatcttacaaaaaccgtctacttaat ctataattcatgcaaacaaaaggtatggttgtccattaattattgtccaaatgttatagtccaaacgtta cagtccatgtgttcatcttctttccaatagatgacctcaagtactgaatttcaaacaaatggggcaaata gttcttgaactttatcacagaattatgaaaaagatctccaaacacttgtaagctttttgtatcaaaacta aagagataaatgtatcccaatcaaacaatatatgtgtctaaattgacgctagtactctccactagcaaaa tcaaagtctggcttaatcgttcaaagctataagattaagcgactttaacatccaataacatataatgatt tttgttttatatagactctcgacaatgaaacagaaatcgagataagaagaaatcaaagagtttacgacaa aagtaacccaaacgtttgcaacatttcacaacaaaagtaaatcaaactccaaaactaaaactcgaatatg taattgtttggtgattggttagtcaagtttgatgccattgcactcgaaaatccagccctaccacaaaaca agtaatcatagtaaatatctgagagttatcagaagaatagataaccaccgacttaaatgtcacaatacta ctcaacaaactaaccagttgaatgagacctccgaaattgaagcaagtgcaactccaccaacaattggtac aatggcactgagtacctatggagtaggtttctaaaaaaggttaataaacaaattatgcttacacaaatca aacaaaagcgatgactaatatagactatccttaacatgccgttagaaacaagaatcaaatagcaacttag tccagacaggaacatttggagacatgtttagatcgcttgaagaagcggcggttataggatggtggcggag agagagtcgccgttgttgtaggagagggatcgacggagagagggaaaatacggcggagctttgcatcgtt tagatctgaaatcaaaagttgttggtgagagtggagaacgaggaagaaggcgtttttagaataaagatcc ggagtcgagaaactgtaatttaggattttttattagatttagattttttatagaattatgaaaataaact ttgatggtaactgtaaagtcgccgtgtacgtaaaccaaatttggtttagggaatacggatttggtttgat ttatagataaaaaacagttttagggtataatggtaactttgattggacaaagtgccttgtttttttaaag tgttgtatcacgtaaattgttttgaaaaagtgcctcagagggcaaatatctc1