;ID ATDNA12T3A DNA ; ATH ; 2372 BP ;XX ;DE ATDNA12T3A is a non-autonomous DNA transposon. ;XX ;AC AL137079. ;XX ;DT 09-JAN-2001 (Rel. 6.0, Created) ;DT 09-JAN-2001 (Rel. 6.0, Last updated, Version 1) ;XX ;KW Non-autonomous DNA transposon; 12-bp TIR; 3-bp TSD; ;KW ATDNA12T3A. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; ;OC Dilleniidae; Capparales; Brassicaceae. ;XX ;RN [1] (bases 1 to 2372) ;RA Kapitonov,V. and Jurka,J. ;RL Direct submission (January, 2001) ;XX ;CC ATDNA12T3A is a non-autonomous DNA transposon from unknown superfamily. ;CC It has 12-bp terminal inverted repeats and is flanked by 3-bp ;CC target site duplication. Harbinger and En/Spm are two known classes ;CC of autonomous DNA transposons whose transposases generate 3-bp target ;CC site duplications in the A. thaliana genome. However, its unlikely ;CC that ATDNA12T3A belongs to one of these classes since it has ;CC completely different terminal inverted repeats. ;CC This particular copy was found as an insertion into a copy of ;CC of the ATHILA6 retrovirus (chromosome 3). A second, 87% identical, ;CC copy is present in chromosome 4 (AL16150, position 82230 - 79733). ;XX ;DR Positions 48998 51369 Accession No AL137079 GenBank (rel. 121) ;XX ;SQ Sequence 2372 BP; 578 A; 450 C; 611 G; 733 T; 0 other; ATDNA12T3A ttgtagcaccccttatagggaagtaagaagtctggaggagttgagcaggattttgagcttttgcgtgagt taagtaagcttccattgaaggagaaggggaagagcaaaggtgaactccatggaagaagaaaaaccttact ggaggacaaagacgagaagaaaggtgattatgttgccctcgctttaaacccgtctcaaattgaattgaaa tgacttgacccgcgagagtggttcccaaagcttagagaagtgagaagaaatccgattagggaagaaagaa taggatgaaattaaaggattcatcgatcgagagatcaagctgaatcacccgaccaagaaatctatggttg agagcttggattcagaagaacttttgagactttgaagatttttgaggagaagatgattatttttgtctaa gtgtttggaatgaatgaatgagggttgcgttatttatagaagagaaggaaacttggagccgaatccattc aggcgaagccatgcaaatcaaatatggcaaactttgtgaccaagtcggcttgcatggagccgaagcgaac aaaacttggcgccctagtcccttggtcggacgccattcaaaatgcttgccatttgttgttgccacgcggc cgaattctcttgcatgtgcgagttgtagaacgtgcctcgccaagtgtcaacggacgtgagccaagtgtcc taggacgctaactctcgccaaacgatcggaccgtatatataaaccaccctcttcagttccgaacattcct cttgagaatccaaaaataactaagaagtttttaagagtttctagtgagttttaaagagagtttccgagag ttctagggagagtttttgcgagagcttttagaggagttcaagagaggtttcatggagaaggcggaggaag atcttgacgagaaagtcgggtaaccaagatcgccggtgaagcattccgagccttaacctctcgagccgtt tctagttctatgagttcgcgtccaccttttcttgttgcattctcatgctagggtttcattcattctcgga tttggttacatgttgataagctatgaccttaatgcatatagctcacttagaaacctcaccgttcatttct tcactacatgtctaaaatccggctaggttaaatgaatctcatacagaactcatcacccatcatgcttgtc tttgttattcttaatccagctaggttacgttgtgtgttgcatttagttttctagggcttgcttgtttgtt tgtgtgtttctttgcttgttgagtcttgtaagtcctgcttgagtgtcgccatcttcaaatccttgtcgga tgagagatgtgcatttttgtattgttgagtctaggtgatcttggacgcggagtccatggatcgtagatcg agtctagtttagggtgctgctatttcctgcctgtgtatgtggaaccttcgagccttggtcccaagggaac gatcgttggttagtctcagaacctaggccgatggtgcatgacgatgcattatgggcttattggtatcctg tgtgggttcaataaagtcgtgatcttgttggtttcttgtgtgggttcaacgagtggttggtttgtttgac ggatccatgtaggagaacttaacttccgacgttttgtgtgaggaggaatagagcacaggacccataggtc gtgtctaggtcgagtctaggttgagtcataggtcgtgtctaggtcgagtctaggatagatcaagtcttgt catgtttgtgtgtcttgtgtttttctttgcttccgcatgtttttctgatccatgttgtcttctttcttgc ttgctttcgttcattaacctccctctaggattgaactgcattagacagcttagaattgccataggttgtg tgctgcatggtcccgactcacttagtaatgctagattactcatgattttacttgtctttcaggcgcctgt agtctcggacgtcaagacgaaagacgaacgcaaggccattcggactaggttattatttttctttagttgc ttttgtaaaacctcattttgtatctctacgagttttatatgcggatccgtttactaatcgtttgcttttt gtgggttttattcgaataagtacaaagggttttacaaatgcggatgttttgagatgatacaaggctttgt ccgagccgcacaacactaggttcatcgcaagggctggcaaacctacgcggggaatctcgtggggagatga ccggatgcggtttggccgtggacttggaaccccgagactttggccgagttgcgaatggttctctccatct gtgatgcccacccgagtcaggcgtggttagtccggtcatggccaggctcgggggtgttacaa1