;ID ATCOPIA7I DNA ; ATH ; 4337 BP ;XX ;DE Internal region of ATCOPIA7 LTR-retrotransposon. ;XX ;AC AF080119 ;XX ;DT 12-APR-1999 (Rel. 3.2, Created) ;DT 12-APR-1999 (Rel. 3.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW ATCOPIA7LTR; ATCOPIA7I. ;XX ;OS thale cress. ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Charophyta/Embryophyta group; ;OC Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; ;OC Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; ;OC Arabidopsis. ;XX ;RN [1] (bases 1 to 4337) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (March 1999) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA7 is a copia-like retrovirus; its ORF encoding copia-like ;CC polyprotein is not interrupted by any stop-codons; its LTRs, ;CC ATCOPIA7LTR, are 99% identical. We presume that ATCOPIA7 may be ;CC an active retrotransposon. ATCOPIA7 provirus is bordered by ACTTTC ;CC target-site duplication. ;XX ;DR Positions 54754 50418 Accession No AF080119 GenBank (rel. 109.0) ;XX ;SQ Sequence 4337 BP; 1139 A; 985 C; 849 G; 1364 T; 0 other; ATCOPIA7I tggtatcagagcttaggactttgttcctaagccatggaagaatctatttttgtttcctctcttaacatct ctcaagttgttactctcaaactcactcccacaaactaccttttgtggaaaacccaatttgagtcttacct ttcatctcatcttcttctaggatttgttaccggcgccactcctcggcctgcctccaccatcattgtcaca aaggatgatattcagtctgaagaagcaaatcaagaatttctgaaatggactcgaatcgatcagttggtca aagcttggatttttggatctctctctgaagaagctctcaaagttgttattggcttaaactctgctcaaga ggtatggcttggtttagcaagacgttttaatcgtttttccaccactaggaaatatgatctgcagaaacga ctaggcacttgttcaaaagctggaaaaacgatggatgcttatctaagtgaggttaaaaacatatgtgacc agcttgattcaattggctttccggttacagaacaagagaagatttttggtgttctgaatgggctaggaaa ggagtatgagtccatagcaactgtaatagaacactctcttgatgtgtatccaggtccgtgttttgacgat gtcgtgtacaagctcactacgtttgatgataaactctccacttatactgcaaattccgaagtcactccac atctggccttttacacggacaaaagctattcttcacggggtaataacaatagccgtggtggaagatatgg taattttcgcggtcgtggttcctattcttcgcgtggtcgtggttttcatcaacagtttggttctggttca aacaatggctctggaaatggttcaaaacccacatgtcaaatttgcaggaaatatggtcactcagccttta agtgttacacacggtttgaagaaaactatcttcctgaagatcttcctaatgcatttgctgctatgcgggt ttccgatcaaaatcaagcttcaagtcacgaatggcttcccgactcggctgctactgcgcatatcacgaac acaaccgatggccttcaaaactctcagacatactcaggtgatgattctgtgatagtagggaatggagatt ttctgcccatcactcatattggtactatccctctgaacatttctcaaggtacattgcctttagaggatgt cttagtatgtcctggaataactaaatcgcttttatctgtttccaagcttactgatgattatccctgctct tttacgtttgactctgattctgttgttataaaggacaaacgaacacaacaactcctcacacaaggaaaca agcataaaggtctctacgtgttgaaggatgtcccgtttcaaacttattactctaccaggcaacaatctag tgatgatgaagtgtggcatcagagattgggtcaccctaataaagaagttctacaacaccttatcaaaact aaagctattgtagtcaataaaacaagctccaatatgtgtgaggcttgtcaaatggggaaagtatgtcgtc ttccttttgttgcttctgaatttgtatcttctcggcccctagaacgtattcattgtgatctatggggccc tgcccctgttacttctgctcaaggttttcaatattatgtcatctttatcgacaattattctcgattcaca tggttctatccattgaagttgaagtctgattttttctcggtctttgttttgtttcaacaacttgtcgaga atcagtaccaacataagattgctatgtttcagtgtgatggtgggggtgagttcgtctcatataaatttgt tgctcatcttgcttcatgtggtattaaacaattgatttcatgtccacatactccgcagcagaacgggatt gctgaaagacgacatcggtacttgactgaacttggcctttctttgatgtttcatagcaaggttcctcata agctatgggttgaagcattctttacttcaaactttttgagcaatcttctgccttcttctactttgtctga taataagagtccctatgagatgttgcatggaacaccacctgtttacacagccctgcgtgtttttgggagt gcttgctacccctaccttcgtccctatgcgaaaaacaagtttgatccaaagtctctcctctgtgtgtttt tgggatataacaacaaatacaagggatatcggtgtctccatccacctacgggcaaagtctacatctgtcg acatgttttgtttgatgaaagaaaatttccctactccgacatttattcacagtttcaaacgatttcgggt tctcctctgttcactgcttggcaaaaagggttttcctctaccgctttatcacgtgaaactccatctacaa acgtggaagacatcatctttccttctgcgaccgtctctagctccgtaccaaccggttgtgctcccaatat agccgaaacagctacagctcctgatgttgatgtggctgctgctcatgatatggttgttcctcctagcccg atcacatccacatcgcttcccactcagcctgaggagtccacttctgatcaaaatcactactctacagatt ctgaaactgctattagctcagccatgactcctcaaagcattaacgtctctttgtttgaggactctgactt tcctcctctgcaatcggtgatctcgtcgactactgctgctcccgaaacttcccatcctatgataactcga gctaaatcaggtatcacgaagcccaatcctaaatatgctctgttctctgtcaagtctaattatcctgagc caaaatctgtcaaagaagctctcaaagatgaaggctggacaaacgcaatgggagaagaaatgggaactat gcacgaaactgatacatgggacttagttcccccagaaatggttgatcgtcttcttggatgcaagtgggtg tttaaaacgaaactaaattctgatggtagtttggatcgtttgaaagctcgtcttgttgcaagagggtacg agcaagaggaaggtgtggattacgttgagacatacagcccggttgtcagatctgccaccgttcgatccat tcttcatgtcgctacaattaacaaatggtctttgaagcaacttgatgtgaaaaatgctttccttcatgat gagctaaaagaaactgtgtttatgacccaaccccctggttttgaagatccttctcgaccggattatgtat gtaagctcaagaaagcaatttacgacttaaaacaggctcctagagcttggttcgataaattcagctcgta tcttctgaagtatggatttatctgcagtttttctgatccatctctctttgtttatctaaaaggcagagac gttatgttcttgttactatacgtcgatgatatgattttgaccggtaataacgatgttctccttcaacaac ttctgaatattctcagtaccgaatttcgaatgaaggacatgggagcattacattattttttggggattca agctcattatcacaacgatggtctcttccttagtcaggaaaagtatacctctgatttattggttaatgca ggcatgtctgactgctcatccatgccgacacctcttcagcttgatctattacaaggtaacaacaaacctt ttcctgaacccacttattttaggcgcttggcgggaaagctacaatatcttaccctcactagacccgacat ccagtttgccgttaacttcgtttgtcaaaagatgcacgctcctacaatgtctgatttccatttactcaag aggatcttgcactatcttaaaggtacaatgacaatgggaattaacttatcttccaacacagattctgttc ttcgttgttatagtgatagcgattgggctggctgcaaagacacaagacgatctaccggaggtttctgcac attccttggctataacataatctcgtggtctgctaaacgtcatcccactgtctccaagtcctccactgag gctgaataccgaacattgtctttcgctgcctctgaagtgtcatggattggtttcttgcttcaagaaattg gacttccacaacaacaaatcccggagatgtattgtgacaacctttcagccgtatatctatctgctaatcc agctcttcactctcggtccaaacattttcaggtggactattattatgttcgagaaagggtggctttaggc gctctcaccgtcaaacacattccagcttctcaacaacttgctgacatcttcactaagtctcttcctcagg caccgttctgtgatcttcggttcaaacttggtgtcgtcttgccgcctgacacaagtttgagggggtg1