;ID ATCOPIA68_I DNA ; ATH ; 4165 BP ;XX ;DE Internal region of ATCOPIA68 copia-like LTR-retrotransposon. ;XX ;AC AC005171 ;XX ;DT 26-OCT-2001 (Rel. 6.2, Created) ;DT 26-OCT-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW copia-like polyprotein; ATCOPIA68LTR; ATCOPIA68_I. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] ;RA Lin,X. ;RL Direct submission in GenBank (March 2000) ;XX ;RN [2] (bases 1 to 4165) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (August 14, 2001) ;XX ;CC ATCOPIA68 was identified originally by [1]. Its boundaries ;CC were corrected by [2]. ;CC ATCOPIA68_I is an internal region of the ATCOPIA68 copia-like ;CC endogenous retrovirus flanked by the 9% divergent ATCOPIA68LTR ;CC long terminal repeats, and by a 5-bp target-site duplication. ;CC ATCOPIA68_I encodes well preserved remnants of the ATCOPIA68p ;CC copia-like polyprotein. ;XX ;DR Positions 59037 54873 Accession No AC005171 GenBank (rel. 124.0) ;XX ;SQ Sequence 4165 BP; 1365 A; 617 C; 1071 G; 1112 T; 0 other ATCOPIA68_I aattggtataagagctccaggttctcgtgttgactgaacgttgttacaaggatgacgaactcgaagatca agatatcggtgttcgatggaactggtgacttctctctctggaagacacgcatgttctctaatcttcgaat cctaggcttgaaggatactctggtggaacaagcttcgttcccaccactgtcagaagaagatgaagcagat ccgacgaagaagaagaagcggatcgaagaagaaactgagaagattgaacgatgtgagaaagctatgaaca ttatctttcttaatgtcggtgataaggtattgaggaagatcgatcagtgcaagactgcagccaaagcgtg gatgttgctggaaagattatatctggtaaagactttaccaaatcatgtgtatttgcaactcaaggtatac aactataggatgcaagaatcgaagtcacttgatgagaacattgatgagttcttaaagatgatctcagatc taagtaacttgcaaatccaagttcctgatgaagtacaagcgatcttgattctgagttctctcccagtcaa gtatgaaatgttaaaggagaccttgaaatatggaagagaaggcttaaaacttgaagaggtgataagcgca tctaagtaaaaaaaattagagttccaggcagactcaagctcaaggtctgcaacacaaggtcttcatgtta aaggaaatcagaataacaattcaagatcaagatctcaagacggcaagaagatatgttggatatatggcaa agaggatcatttcaaaaggcaatgctataagtggctagagaagaacaagtcaagtgggaacacacaagaa gcaggtgcgtctaggctggcaaaggatgatgctcaagactaggttggtttagtagcttctgaggtaaatc tgagtgaggatcgacttgaccagaatgaatggattatggatactggttgttcatttcatatgacaccaag aagagatatattcattgagattgaggagttgacttccgggaaagttagaatggcaaataactcattttca gaggtaaaaggtatcagtaaagtgagatttgccaacatagatgggactacatttgtgttacatgatgtaa gatacatgcctggaatgtctcggcatcttattctgatgggtactctagaagcaaaaggatgtgtgtttga gggaaatgatggtgtattggaggtaatgcagggaaatacagtgttcatgaaagggtcacaaagagcttct ttatacatcctgcaaggagaagctaagaagtcggaagctatggtggctgagtcaggagattcggatatgg atctaatgcaggtatgacatagcaggctcggtcatgtaggatagaaaggaatagatgagctggccaagaa aggatgttttggcaaggataaggtctcaagtcttaagttatgtgaagattgtgtttttgtataacacata aagtgagctttgggcaagttcaacatattactaaggagaagctagattctgtgcactcagatttgtgggg atcacccaatgtgccttttagcctcgataaaatgtcagtattttctcacgttgactgatgactggtctag gaaggtttgtatatatttcctcagaaccaaagatgaagcgtttgatgcgtttgtactgtgaaagaagatg gttgaggttcagagtgagagaaaggtgaaaaggttgcgtactgataatggtctagaattctgcaatcaca agttcaatgacttctgcaaacaagaaggaatggtgagacacaggacatgcacctatacattgcaacaaaa cggagttgctgaaagacttaagaggactataatgaagaatgtgagaagcatgctgagtgagagtggtctt ggttagaagttctgggctgaagcagcttcaacgtctttgtacctaattaatagaacaacatcatcaacga ttgatttccagatcccaaaagagagatggacttcagctattccagacatgttaggactcagaagatttgg atgtctagtgtttattcactcagatgaagggaaactgaatcctagggaaaaaagaggcatcttcactggt tatcccgaaggcgtgaaaggttttagagtatggttactagaagatcagagatgcatgattagcagaaatg tggtcttcaaggagaaagtgatgtacaaagatgttatagctcaagagaaatcaggtatgtcctctaaccc gtttgatttatctactgatgagtgtgcttgttaaaatgcaggaacagatagagcgaagaaggactcattg tagagtggagctattgttcaaggtggagaaaccacacctgaacagaatactaacgagacaacaacagatg agattgagctagaagaagttgctgggtatgcttatttagtcattgaagatggaggaaagtcagaacaagg aagttttcaggaagctttagaagatgctgatcaagataaatggatcaaagcgtcagatgaggagatggaa tctctcatgaagaataaaacctggatattggtggaaaggaacaaacaacagaaacctattggttgtaagt gggtgttcaagaggaaggctggaatagcaggagttgagggtcccaggttcaaggccagacttgtagctaa agggtattcacagaaagggaatagactatcaagagatcttttcctctatagtgaaacatgtctccatcag atttttactgagtatggtaactcattttgacatggagctttagcaaatggatgtcaaaacggcgtttctc catggatttttggatgaaacaatattcatggagcagctagaaggctcattgatgagaagaatctagataa agtgtgtctgttacaaagatctctgtatagcttgaaataatcacccagacaatggaacaccaggttcaat gatttcatggaggctcataactatgagaggagctcatacgacagttgtgtgtactttaagaaatatgcag acggtgattatgtgttcatgttgctatacgtagatgacattcttattgcctccaagaatatgaagcatgt aagtgaactcaaagcactgttgggatctgagtttgaaatgaaggacttaggtgaagcaaagaagatcttg ggtatggaaatagacagaaacagacttaaatgtaccctttctatctctcgggagggttatctttcaaaac tattgggaacgtttaacatggatcagtctaagcttgttttaatgccagtgggaatacatttcaagttgag gtctgctacagatgaggaagctaagagtcagtatgaatcaatgagagctgttccatatcaaagcgtagtg ggaagtctcatgtatgccatgataggtacaagaccagacttagcacactctattggtctagtttgcaggt ttatgagtaaaccacttaaagagcattggcagggagtcaagtgggttctcagatatattcagggttcact caagcgaaagttatgatacagtaacaaaggggatttcataattttaaggttactgtgttttagatcatgg tgcagatcaagatgggaggaggtcaacttcaggagtggtattcactgtaggtgggtaatgttgttagttg gaggtctagtctatagaaagtggtagcattgtcatcaacagaagctgagtgtatggcattaacagatgcg tctaaggaagcagtttggttgttagggctcatgaatgagcttggttttgagcaagaagcagtggatattt acagtgactcgcagagtgccattgcattagctaaaaatatagtccatcatgaatggacgaagcatataga gatcaagtatcacttcattagagagctgatctacaatggcttagtaagaatgaagaagattgctatagaa accaatcctgctgatatcttcacgaaggtcgtaccggtgggcaagcttcaggaagctctagagttgctca gagttactgagaactaagaagaggggttaagtcccaagacatgaagctgagtgggtttactcaggagata agtagttgagtgagtgtactcaaagtttaaaagttggttaagttgaatcaggttcggaggtggagtcaag aactaagtcacgtcattagggtcaaggtggagaat1