;ID ATCOPIA64_I DNA ; ATH ; 4145 BP ;XX ;DE Internal region of ATCOPIA64 copia-like LTR-retrotransposon. ;XX ;AC AC007289 ;XX ;DT 05-NOV-2001 (Rel. 6.2, Created) ;DT 05-NOV-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW copia-like polyprotein; ATCOPIA64LTR; ATCOPIA64_I. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 4145) ;RA Kapitonov,V.V. and Jurka,J. ;RT Internal region of ATCOPIA64 copia-like LTR-retrotransposon. ;RL Repbase Reports 1:(2) p. 14 (2001) ;XX ;CC ATCOPIA64_I is an internal region of the ATCOPIA64 copia-like ;CC endogenous retrovirus flanked by the identical ATCOPIA64LTR ;CC long terminal repeats, and by a 5-bp target-site duplication. ;CC ATCOPIA64_I encodes well preserved remnants of the ATCOPIA64p ;CC copia-like polyprotein, which is slightly disrupted by a few ;CC false stop codons. ;XX ;DR Positions 21933 26077 Accession No AC007289 GenBank (rel. 124.0) ;XX ;SQ Sequence 4145 BP; 1455 A; 683 C; 974 G; 1033 T; 0 other; ATCOPIA64_I tttggtatcagagcataacctaggtttcaatttttctttttcgaatatgagtgaaattgttgctgcaagc aacaaacctaaagaagggggggggggggtcatcatccattcattgtcccatgctgaacaacgctaattac acggtgtggactatgaggatggaggctactctccgagtgcataaagtttgggaaacaatcgatcctggat cagatgacatggagaagaatgatatggctcgagctcttttatttcaatccgtacccgaatcaactatctt acaagtcggaaaacacaagacctctaaagccatgtgggaagccatcaagacaaggaacctcggtgctgaa agggtaaaagaagcaaagctacaaactcttatggcagagtttgatagactaaatatgaaagataatgaga caatcgatgagtttgtagggagaatatctgagatttctacgaaatcagaatctcttggagaagaaataga agagtcaaagattgtgaaaaaatttctgaaaagcttgccacgaaagaagtatatacatatcattgcagca ttagagcagattctcgatctcaacacaaccggatttgaagatatagtaggaaggatgaaaacatatgaag atcgggtttgtgatgaggatgattcaccggaggaacagggtaaactcatgtatgcaaattcagaatcatc ttatgatacaagaggaggaagaggtagaggtcgaggtcgttcttctggcagaggacgtggaggatatggt tatcaacaaagggacaagagtaaagtcatctgttatagatgtgataaaacaggacattatgcatctgaat gtctagatcgtttgctcaaacttattaaagcgcaagaacaacaacaaaacaatgaagatgatgatgaaat tgagtcgcttatgatgcatgaggtggtttatttgaatgagagaagcgtgaagccaaaggagtttgaagct tgctcagataatagctggtatttggataatggtgcgagtaaccatatgacaggtaatcttcagtggttct ccaagttgaatgagatgatcacaggaaaggtgagattcggtgatgattctcgtattgacataaaagggaa aggttcaattgtgctcatcaccaaaggaggaatacgcaagacattgactgatgtctactttataccggat ctaaaaagcaatatcattagtttgggacaagccactgaagcaggctgtgatgttagaatgaaggatgatc aattaacgttgcatgatcgtgaagggtgtctgttactaagagcaacacgctccagaaacagactttacaa agtcgatttaaatgttgaaaacgtgaagtgcttacaactcgaagcagcaagtgagtcaactaaatggcac gcacgtcttggacattaactttgacacaatccaagctatggtaagaaaggaattggttatcggaatctct aatattccaaaggagaaagagacgtgtggttcatgcctccttggaaaacaagcaaggcagccattcccta aagcaactacttatcgagcatcacaagtattggaacttgttcatggtgatctttgtggtccgataacaca atctacaactgctaagaaaagatacatactcgtgctgatcgatgatcacactcgttacatgtggtctatg ctattgaaggagaagagtgaggcatttgaaaaattcagagatttcaagactaaagttgaacaagaaagtg gagttaagatcaaaaccttcagaacagataaaggaggagagtttgtctctcaagaatttcaagatttctg tgcaaaagaaggcatcaacagacacttaaccgctccatacacaccacagcagaatggagttgttgaaagg agaaatagaacgttgctaggtatgacaagaagcatcttgaagcacatgaaaatgcctaactatttgtggg gagaagcagtaaggcactcaacctatatcatcaacagagtaggaacaagatctttgcagaaccaaacacc atatgaagtttttaagcaaagaaagccgaatgtagaacacttacgtgtatttggatgtattggttatgcc aagattgaaggtccacatttgagaaagcttgatgataggtcaaagatgcttgtttatcttggaactgaac caggctccaaagcatatcgtcttcttgatccaactaaccgcaaaattatcgtaagcagagatgtgtactt tgatgaaaacatgagctagaagtggaacaattcagattctgaaactcgggacatctctggaacattctca cttaccttaggagaatttggaaacaatggaattcaagaaagtgatgatatagaaacagaaaaaaacggag aagaaagtgagaacagtcacgaagaagaaggagaaaacgaacacaatgaacaagaacagattgatgctga agaaacacaaccctcacatgctactcctctgccaacattaagaagatcaacaagacaagttggaaaacca aattatttggacgattatgtcttaatggcagagatcgaaggcgaacaagttctattggcaattaatgatg aaccatgggattttaaagaagcaaacaagttgaaagaatggagagatgcttgcaaagaagagatcctgtc aatagagaagaacaaaacttggagcttaattgatcttccagttagaagaaaagtcatagggttaaaatgg gtttttaagatcaagcgaaattcagatggcagcataaacaagtacaaggcaaggttagtagcaaagggtt atgttcagaggcatggtattgactacgatgaagtatttgctcatgtagctcgtattgaaacaattcgagt catcattgccttagcagcatcaaacggatgggaagtacatcacttagacgtcaagaccgcttttctccat ggggaactaagagaagatgtttatgttacacaacctgagggcttcacaaataaagacaatgaagggaaag tctacaaattacacaaggctctttatggtttaaaacaagcacctcgtgcttggaacactaagctgaacaa aattcttcaagaactgaattttgtaaagtgttctaaagaaccatcagtgtacagaagacaagaagaaaag aagcttctcattgtggctatttatgttgatgatttacttgtgacaggctctagcttggatctaatactct gtttcaagaaagatatggctggaaaattcgaaatgagtgatctgggacagctcacgtactaccttggcat tgaagttctccatagaaagaatggcatcatattaagacaagagaggtatgcaatgaaaattatagaagaa gctggaatgagtaactgcaacccggtcttaataccaatggcagcaggattagagctctgcaaagcacaag aagagaagtgcatcaccgaaagagactacagaagaatgattggatgtctgagatacatagtgcatactcg gccggatctctcttattgcgttggtgtactaagcaggtatctacaacaaccgagggaatcacatggaaac gcactgaagcaagttctaaggtatctcaaaggaactatgtctcatggtctgtacctcaagagaggattca agagcggattagtaggctatagtgatagtagtcatagtgcggatttggatgatggaaaaagcactgccgg tcatatcttctatcttcatcaatgtcccattacatggtgttcacaaaaacaacaagtagtggctctttca tcttgtgaagcggagttcatggcagctactgaagcagccaagcaagccatatggttacaagacctattcg cagaagtgtgtgggacaacaagtgagaaggtgatgattcgagtggataacaagtcggcgattgctcttac taagaatcttgtctttcatggtaggagtaaacatattcatcgaaggtatcatttcataagagaatgtgtt gagaataacttagtcgaagtggatcatgttcccggagttgagcaaagagctgacattctaaccaagccac ttggaaggattaagttcagagagatgagagaactagtaggagttcagtgtgtgttggaagatgacttcaa gcttaaaggggagtt1