;ID ATCOPIA61_I DNA ; ATH ; 4653 BP ;XX ;DE Internal region of ATCOPIA61 copia-like LTR-retrotransposon. ;XX ;AC AC006951 ;XX ;DT 05-NOV-2001 (Rel. 6.2, Created) ;DT 05-NOV-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW copia-like polyprotein; ATCOPIA61LTR; ATCOPIA61_I. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 4653) ;RA Kapitonov,V.V. and Jurka,J. ;RT Internal region of ATCOPIA61 copia-like LTR-retrotransposon. ;RL Repbase Reports 1:(2) p. 10 (2001) ;XX ;CC ATCOPIA61_I is an internal region of the ATCOPIA61 copia-like ;CC endogenous retrovirus flanked by the 4% divergent ATCOPIA61LTRs ;CC and a 5-bp target-site duplication. ;XX ;DR Positions 59468 54816 Accession No AC006951 GenBank (rel. 124.0) ;XX ;SQ Sequence 4653 BP; 1363 A; 833 C; 922 G; 1535 T; 0 other; ATCOPIA61_I tggtatcagagcaatgaattttcaaaattcattcgattcttcttcgttttttgctttgttctttgatgat tctcattgatcttcttcttcttcgatagattcgtttggtttacgtgccggaatcacaaatatcgatcaag ttttcttcagattctgttaacaatggttgtaactcgcaaaatccctcgtcgatcatctcgtgtagcttcg tcagctcgaagacaagtgaatcgtgatgatgatgatgagagttcgccagaaattcctccgattgttcctc cgattgtttctccgattgttcctccggttgttcctccggttgttcccgtttatacatcatcgattgataa tccagatagtattcattctccatatcatctttctaacagtgataatcctggaatttctataatttctgag gttcttgatggtacaaattatgatgattggcatatagcgatgaaaacttctttagatgcaaagaacaaga ttgcttttattgatggatctatatctcgacctagttaaacaaacgctatgttcaggatttggtcacgatg caacagtttagtgaaatcttggattctaaactcggtttcaaaacagatctataaaagcattcttcgtttt agtgatgcatctgagatttggaaagatttggccacacgttttcacattacaaaccttccaagatcatatc aattgtcacagcagatatggtcactacaacaaggttcaatggatcttgctacgtattatactactctgaa gacattgtggaatgagttggatggcgctaattgtgttacagtatgtaaaaactgtgattgttgcaaagct atggaaacaaaatcagaacatgctcgtgttattaaatttttggctggcttaaacgaatcctatgccgtca ttagaagtcagataatcatgaagaagcatattccagaacttgctgggatttacaatttgttggatcagga tttgagtcaaagaaatatcactcctgttcagaatgctgtagcttttaatttttcagcaatggaaccaact caagcttctgttaatgctacttataatcattcaaaactgcagcagaaagtgatttgttctcattgtggat acactggtcacactgtggataagtgttataaaattcatggttatcccataggatttaaacacaagaacaa gaatgctcaacaggataaacagattgttcctccaaaacctgttgttgctcagttagcttttactaatgct acttcgagtgatttgttaacaggaatggcaaaaactctaacaaaagatcagattcaaggggttcttgctt atttttaaggaaaactcaatgatggttctgtgacatggcttctccatctggtgctacgattactgcatta cctggtatagctttttcttcctccacattacgttttattggagccttgaaagctacaggaaatgttttat cttcatcctcatgggtgatagatagtggagctacacatcatgtgtgtcatgatataacattatttcagac attatctgaaaccatgaatgattctgttaccttacctactggttatggagttaaaataacaggaattggt tcagtggagttaagtgatcatatgatcttgaagaatgtgttatattttccagactttcggttaaatttac tgagtgtgagtcagttaaccaaagatttgggatatcgtgtaagttttgatgaaagttgttgcatgataca agatcatatcaaggggttgatgattggtaaaggggaacagatttcaaatctctacgttttggatatgcaa tttctcgtgaagaattcaactcaaccacttgttttttctgcaattcttgttgactctagtttatggcata gtagactaggtcattcatctaatgtcaaaacagatcttgttacagatgtacttggtttcaaacaaaggaa taaagatgattttcattgtgttatatgtcccttggccaaacagaaacgattatcatttccatccaagaat aacatctgtgaatctgcttttgatctcttacacattgatatatggggaccgttttctgtttctacatcat aaggatacaaatactttttaaccattgtggatgatcatactagggtcacctggttgtatttgttgaaagc aaaatctgatgtattgtagatattccctgatttcttgaagatggtggagactcaatataagacagtggtg aaagcagtccggtctgacaatgcacctgagcttaagtttgtgaatttgttcaagtcgaaaggtatcatcg catatcattcatgtccagagactccagaacaaaactcagttgttgaacgcaagcatcaacatattctaaa tgttgcaaggtcattgatgtttcagtcacgggttcctgaagagtattggggagattgtgttctcaccgca gtcttccttatcaatagacttcccacaccactactgaagaataagtctccttatgaagttcttacttcaa agaaaccaaaatacaggcttacgtgtctttggctgtctttgttacagttcaacttcgtcgaagaacagac acaaatttcagccaagagccaaagcttgtatctttctgggatatcctagtggttacaaaggatacaagtt attggatttggaaaccaagtccattcatatttcaaggaatgttgttttccatgaaaccagatttcccttc agttcaggtgattctgctggtcctttctctgatatttttggcagcataaatgaatctcttattgagaatg atacagaaattgttgacagtaacattcctgtagttgtgagtgaggctcctattttgagtgaacctcttac agttgtgaatgattctgtcaatgattcacatgaggattcagctccgaaatcagttcctacaacttcaacc tctcgatctaaaagagagagtaaacaaccagctcatttgaaggattacttttgtaatctatcgagaaaag gagttcaatatccactttctgactatatgtcttatgatcaactttcaactccatatcgagcttatatctg ttcagttacaaagttttcagaaccttcttccttttttcaagctaagaagtctgatgattggattaaggct atgaatgcagagttgcaggctctagaaggcactgctacatgggagatttgttctttgccttcaaataaaa aggccattggttgcaaatgggtttacaaggttaaactcaatgttgatggaaccttagaacgttataaggc tcgtttagtagcaaaaggctacacgcaacaagaaggagttgattttgaagataccttctctccagtggca aaaatgacaacagttaagaccttacttgcagttgcagctgctaagaagtggagtcttcatcagctggata tatctaatgcgtttcttaatagggatttgtatgaagagatttacatgaacctagcgccaggatatacacc aaaagaaggagaggaaatacctcctaatgcagtttgcaagctaaagaagtctctttatggactaaaacaa gattcgagacaatggtttttgaagtttcgttctactttgctgtctctaggctttcaacagtctcatgctg atcacactctatttgtgaaaaaacaacaatggcaggtacattgctgttcttgtctatgtagatgacatag taatagctagcaacaatgatgaagaggttgcaaatctaaaagatgatttgaagaaagcttttaaacttag agatttgggatctttgcaatatttcttcggattagaagttgcaagatctgcctcgggtatatctgtttgt cagaggaaatatgccctggatatcttagaagaaactggtatgttggcttgtaagccatctgctattccga tggaaccgagtatcaagttagttggtgatggagctgaacctgtcattaatgattcggcttcttatcgaag attggtagggaaactgatgtatttgactataactcgtccagaaatcacttacgctatgaacaagttatgt caattcacttcagcaccaaaagggtcacatatgaaagctattcttaaagtcctgcaatatataaaaggca caattggaaatggcttgttctattctgctacttctgactttgttcttaaaggatttacggatgcagattg ggcttcatgtcgtgattcaagaagatctacttctggctattgcatgtttttaggtgaatcaatgatctct tggaaatctaagaagcagcaaatggcgtctcattcttctgcagaatctgagtaccgtgctatgcaatatg ctgtcagagagattgtgtgttagttcatctcttatctgatcttcaagtacctcaacatgctcctgtggct ttcttctgtgattctacaacggcaatacatattgcgaacaattctgtatttcacgaacggaccaagcatg tcgagctggattgtcacatcgttagagacagaattatgagtggtccgattaaaattctacatgtgactac tatcttcagctggcagatgtgtttaccaagtctctgtacccgacacagttcaagtctattgttggcaaga tgtcattgaagtacatgccatcttgagggggca1