;ID ATCOPIA59_I DNA ; ATH ; 4271 BP ;XX ;DE Internal region of ATCOPIA59 copia-like LTR-retrotransposon. ;XX ;AC AL161499 ;XX ;DT 01-OCT-2001 (Rel. 6.2, Created) ;DT 01-OCT-2001 (Rel. 6.2, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; COPIA superfamily; internal region; ;KW copia-like polyprotein; ATCOPIA59LTR; ATCOPIA59_I. ;XX ;OS Arabidopsis thaliana ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; ;OC euphyllophytes; Spermatophyta; Magnoliophyta; eudicotyledons; ;OC Rosidae; Capparales; Brassicaceae; Arabidopsis. ;XX ;RN [1] (bases 1 to 4271) ;RA Kapitonov,V.V. and Jurka,J. ;RL Repbase Reports 1:(1) p. 20 (2001) ;XX ;CC ATCOPIA59_I is an internal region of the ATCOPIA59 copia-like ;CC endogenous retrovirus flanked by 1% divergent ATCOPIA59LTR ;CC LTRs and a 5-bp target-site duplication. ;XX ;DR Positions 15478 14011 Accession No AL161499 GenBank (rel. 124.0) ;XX ;SQ Sequence 4271 BP; 1459 A; 641 C; 1020 G; 1151 T; 0 other; ATCOPIA59_I aagtggtatcggaacgttggttcgaaagattcgctcgatggtaatgacgatgaaggtcgagattaaaacc ttcaatggcgatcgagacttctcgttttggaagataagaatagaagctcagctcggcgtactaggcttga agaacagccttacggattttaaattgaccaagacagttcctgtggcaaagaaagaggaaaaagaatcaga atatgaagatgatgcatctgatataaagcaagctactgaagaaccagatccgattaagtttgagcagtct gaacaagcaaagaacttcatcattaatcacatcactgatacagttcttttaaaggttcaacactgtaaga ccgctgcagagatctgggcaacattgaacaaattgttcatggaaacttctttgcttaatcgaatatacac acaattgaagttgtattcattcaagatggttgatactttgagcattgatcagaatgttgatgagtttttg aggattctggctgagttaggaagtttatcaatctatgttggaaaagaggttcaagctgtcttgatcaaaa tttactgccatctagttacatccaacttaaacatactcttaagtatgggaacaagactctctcagtacag atgtggtatcatccgccaagtcacttgagagaaagttatcagagactcaagaaagcaacaaaaatgtgtc catggctctctacacaacagatagaggcagacctcaagtgaggaatcaggataagcaaggtcaaggaaag aatagaggtaggtctaactctaaaacgcgagtgacttgttggttttgtaaaaaggaagctcatgttaaga gagattgttttgcgagaaagaagaagctggaaaatgagaatagagcaacaatgatacttttgggtgatga tcacacagtagaatcaagaggatgtggtaccatcaaattgaacactcatggaggtttaatcagaatgctg aaaaatgtcagatatgttcctaacctaagaagaaacttgatctctactgggacacttcactctcttggtt acaaacatgaaggtggagaaggaaaactgagattctacaagaatggcaaaactgctttatgtggatactt gatgaacggtctctatattctggatggacacacagtagctactgaaacctgcaatgcagaaagtgctaag aacagcacaaagctgtggcatagcagacttggtcacatgagcataaataatatgaagatcctataaggca aacagactgattgagaaaaaggaattcaaggacttggacttctgtgaacactatgttatgggaaaatcga agaaactcagttttaatgttggtaaacatgttacagaagacatacttggatatgttcatgctgacttgtg gggatcaccaaatgttactccatctatctcgggtaaacaatacttcttatccattatagatgacaaatct agaaaagtttggttaatgtttctgaaatcgaaagatgagacatttgataagttctgtgaatggaaggaaa tagtagagaatcatgtgggaaagaaggtcaaaactctaagaactgacaatggattggagttttgtaataa cagatttaatgactattgtgccaagactggcattgaaagacaccggacgtgtacctatactcctcagcag aatggagtgactaaaaggatgaatagaacaataatggaaaaggtgaggtgcatgcttgatgaatcaggtc ttgaagaaacgttttgagctgagactgcagcaacagatgcatacttgattaacaggtcacctgcttcagc agttgatcacaatgtgccagagcagttgtggctcaacagagaacctggatataagcacctgagaagattc agttctatagcctatgttcatcaagaacaaggcaagttaaaaccgagagtattgaaaggagtgtttctcg gatatcctcaaggcactaaaggttacaaggtgtggttaattgatgaagaaaaatgtgttatcagcagaaa tgtggtgtttaatgaagattcagtgttcaaggacttacagtcaggaagcaaagatgaagatgaaacagta acacaggaatctcagattgagattgaaacgccgccaaaatcagaacttgaaacacagaatcaggttcaag gtggagctactcaagtccagctcaatgattctgaagatgaatataatgatgttgaaggagtagttacatg aagcaatctgaagacttatcagttggctagagatagggtcagaagaacaattagaccacctgcaaaactt actgactatactcagtttgcttttgctctagtcatggcagaagaagttgaatcagaggaaccagtatgtt ttcatgatgttaaggaagacaaagactgggaaaaatggcatggaggcatgatagaagaaatggattctct gttgaaaaatgcaacctgggatatagtcgacaaacctaagaatcaaaaagtgataagctgtcattggttg tacaagaagaagcttggaattcctggtgttgagctaccaagatataaggcaaggttggtagcaagaggat tctctcatagagaaggaattgactaccaagaagtgttctcacctgttgtgaaacacacatcaatcagaat cttactatccctaatggttaaagaggacatggaattagaacagatggatgtaaaaacagcatttttgcat ggagaacttgatcaaacattgttcatggaacaacctgaaggctttgaggtaaatcctgaactagatcaag tatgtttgctaaagaaatctctttatggcctgaaacaggcacctagacagtggaataagcggttcaatgc attcatgatggatcagaagttcagtagaagtgtgagtgattcatgcgtctatgttaaagaggtaagcaat ggtgaatgtgtctacttgctgctctatgttgatgatatgttgttagcagctaagagtatgacagagatta aaaagcttaagaaagttttgagtagagaatttgaaatgaaggatatgggagctgcaagtaggaaattggg aatagatatcataaggaataggagtgaaggaactctatgcttgtcccagactagttacttggaaagagta attcagaagttcagaatggatggggctaaggttgtgaatactccaattggtgctcatttcaaattgtcat cagttcataacgatgatgaaagagtaggttctgagaaagttccctactctagtgttgtcggcagtctcat gtatgctatgattggaactagaccggatatagcttatgctattggactagttagcaggtttatgagcaag caaggagaagtacattggacagcagtcaagtggttgttgaggtatcttaaatggtcaataggattaaact tgatgtatactaaaggatttgattttaaagtgcagggttattgcgattcagatcatgctgcagaccttga taagaacatgtctattagcggatatgttttcacagtgggaggcaacattgtgagctggaagtcatgtctg caaccagttgttgcgctgtcaaccactgaagcagaatacatagctcttactaaggctgtaaaggaggcta tgtggataagaaacttgttggatgatatgatgcttggaactgagactgctgaagtgtgaagtgactcaca gtctgcattatgtttatcaaagaacaatgcttttcatgaaagaacaaagcacattggtaagaagtatcat ttcatcagagacattattgaagctggtgaagtcgaagttcataagattcacacgactaggaatccagctg atatgctcacaaaaggtataccagtttcgaagtttgaagcagcattggagttcctgaagctgctcaggta aacaggcgagaattcgccaaaaccagaggttacatccaagtaatgcaattcacttgaaggagaaagaaac ttgaatcaaggtggagtgttgtgatgttggtttctgattcagttttaaggtttggtttaacctagaaatt gattggagattgaagtcggtttagttcggtttgtctcggttatcaattgaagaagaaaagtaggaagtca aagcctctagtcgcgatagagtttttgttgtttcaagtataaaacataaattgttattttcttctttatt cattctgttatctctgctattgagagagagaagtaagagagagagagagagagagagagagagagagagc t1