;ID ATCOPIA41LTR DNA ; ATH ; 608 BP ;XX ;DE Long terminal repeat from ATCOPIA41 copia-like LTR-retrotransposon ;DE - a consensus sequence. ;XX ;AC . ;XX ;DT 31-AUG-2000 (Rel. 5.8, Created) ;DT 31-AUG-2000 (Rel. 5.8, Last updated, Version 1) ;XX ;KW LTR-retrotransposon; endogenous retrovirus; COPIA superfamily; ;KW long terminal repeat; ATCOPIA41I; ATCOPIA41LTR. ;XX ;OS consensus ;XX ;OC Arabidopsis thaliana ;OC Eukaryota; Viridiplantae; Charophyta/Embryophyta group; ;OC Embryophyta; Tracheophyta; euphyllophytes; Spermatophyta; ;OC Magnoliophyta; eudicotyledons; Rosidae; Capparales; Brassicaceae; ;OC Arabidopsis. ;XX ;RN [1] (bases 1 to 608) ;RA Kapitonov,V.V. and Jurka,J. ;RL Direct submission (August 2000) ;XX ;RN [2] ;RA Kapitonov,V.V. and Jurka,J. ;RT Molecular paleontology of transposable elements from ;RT Arabidopsis thaliana. ;RL Genetica 107 (1-3), 27-37 (1999) ;XX ;CC ATCOPIA41LTR is a consensus sequence of a long terminal repeat ;CC from ATCOPIA41 copia-like retroelement. ;CC Individual copies are 95% identical to the consensus sequence. ;CC There are ~10 copies of the ATCOPIA41LTR in the genome. ;XX ;DR [1] (Consensus) ;XX ;SQ Sequence 608 BP; 195 A; 85 C; 157 G; 171 T; 0 other; ATCOPIA41LTR tgaagatgcagagttcaatcaatcagctgatggcgatcagagcgttgatggatttcaggaagctgcatcg agtttcatcagacgcttgatttgcagacatggatgcgagagcaaacgtggcaagctaaggcggatgatgt ggagagccaaggatggaagctgacttggcgtggtgtcaaagacaagaattaccaagaagatatggaagat atcatctcgaagatttaggaaggaataagcttgaagaaaacaagaaagattccttaaaacgagattctcg gagatcctaggtttagggttctggagagtaggtataagtattctagagtttagtgtgaggcgctttgagc actctagaatactacgatacgattgaaaacttcagagcattgcaaaagcttgaaggtgagtgtgtaattc tctttgtcttcacgtgagagtgataagaaacagagaagagaattaggcttagatattcttagtcgggttt gatcttttgggtagaatagatcaagtaatctccgagataacatttgtaaacagtttgttatcaataagaa tatagttataagcaattctctgtgttgtgttgatctctatacccttta1